BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1830.1
(341 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAA11674.1 unnamed protein product [Nicotiana tabacum] 418 e-132
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro... 373 e-117
CAN65281.1 hypothetical protein VITISV_035564 [Vitis vinifera] 364 e-116
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 418 bits (1075), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/412 (52%), Positives = 267/412 (64%), Gaps = 78/412 (18%)
Query: 1 MNLEIEQLDVKTVFLHGDLEEVVYMEQPTEFEVKGKEHLICKLDKSLYGLKQAPRQWHKK 60
+NLE+EQ+DVKT FLHGDLEE +YMEQP F+ KGKE +C+L KSLYGLKQAPRQW+KK
Sbjct: 915 LNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKK 974
Query: 61 FESFMKDQGYHRTASDHCVFVHKFPDGDLIILLLYVDDMLIVGQDANKISRLKKELNKYF 120
FES M GY +T SDHCVF KF D D IILLLYVDDMLIVG++ ++I+ LK++L+K+F
Sbjct: 975 FESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFF 1034
Query: 121 DMKDWGPAKQILGTHISHYRKAGKLCLSQERYIEKVLERFNMNKTKLVSCPLASHFKLTR 180
MKD GPAKQILG I R+A KL LSQE+YIEKVL+RFNM KTK VSCPLA+HF+L+
Sbjct: 1035 AMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLST 1094
Query: 181 DQCPSTRSEKEEIEKITYASVVESLMYAMV------------------------WGAVSW 216
Q PST E+ ++E+I YAS V SLMYAMV W AV W
Sbjct: 1095 KQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKW 1154
Query: 217 -------QSKLQKCVALSN------TEAE------------------------------- 232
SKL C N T+A+
Sbjct: 1155 ILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQK 1214
Query: 233 ----------YIAITECCKDMLWVKRLLEELGMKQDNYVIHCDSQSAINLSKNSSFHSKS 282
+IA TE CK+++W+K+ L ELG QD Y + CDSQSAI+L+KN+SFHS+S
Sbjct: 1215 CVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRS 1274
Query: 283 KHINVRYQWIQDVLEEKVLKIEKIHTDDNGSDMMTKPLPKCKHELCSSVAGL 334
KHI+VRY WI+DVLE+K+L++EKIHTD+NGSDM+TK LPK K E C AG+
Sbjct: 1275 KHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFEFCREAAGI 1326
>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Gossypium arboreum]
Length = 1184
Score = 373 bits (958), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 257/412 (62%), Gaps = 78/412 (18%)
Query: 2 NLEIEQLDVKTVFLHGDLEEVVYMEQPTEFEVKGKEHLICKLDKSLYGLKQAPRQWHKKF 61
+LE+EQ+DVK FLHGDLE+ +YMEQP F + KE +C+L KSLYGLKQAPRQW+KKF
Sbjct: 769 DLEVEQMDVKIAFLHGDLEDELYMEQPEGFVAQRKEDYVCRLKKSLYGLKQAPRQWYKKF 828
Query: 62 ESFMKDQGYHRTASDHCVFVHKFPDGDLIILLLYVDDMLIVGQDANKISRLKKELNKYFD 121
ES M +Q Y +T SDHCVFV KF D IILLLYVDDMLIVGQ+A++I +LK+EL+K F
Sbjct: 829 ESVMGEQSYKKTTSDHCVFVKKFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFA 888
Query: 122 MKDWGPAKQILGTHISHYRKAGKLCLSQERYIEKVLERFNMNKTKLVSCPLASHFKLTRD 181
MKD GPAKQILG ++ RKA KL LSQERYIEKVL++F+M+K K V+ P A HF+L+
Sbjct: 889 MKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQKFSMDKAKAVNTPFAMHFRLSVK 948
Query: 182 QCPSTRSEKEEIEKITYASVVESLMYAMV------------------------WGAVSW- 216
PST EKEE++KI Y+S V SLMYAMV W AV W
Sbjct: 949 HSPSTEKEKEEMQKIPYSSAVGSLMYAMVCTRPDLAYAVGTVSRFLSNLGREHWNAVKWI 1008
Query: 217 ------QSKLQKC------VALSNTEAEYIA------------ITECCKDMLWVKR---- 248
S ++ C V + T+++ IT + W R
Sbjct: 1009 MRYLRGTSNMKLCFGNEKPVTVGYTDSDMAGDIDSRRSTSGYLITYAGGAVAWQSRQQKC 1068
Query: 249 -------------------------LLEELGMKQDNYVIHCDSQSAINLSKNSSFHSKSK 283
++ELG Q+ YV++CDSQSAI+LSKNS+FH++SK
Sbjct: 1069 VALSTTESEFIAATEACKEMLWMKKFVQELGFTQEKYVLYCDSQSAIHLSKNSTFHARSK 1128
Query: 284 HINVRYQWIQDVLEEKVLKIEKIHTDDNGSDMMTKPLPKCKHELCSSVAGLE 335
HI+VRY WI+DVLE K+L++EKIHT+DNG+DM+TK LP+ K E C +G+E
Sbjct: 1129 HIDVRYHWIRDVLEAKLLELEKIHTNDNGADMLTKVLPRGKFEACCLTSGME 1180
>CAN65281.1 hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 364 bits (935), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/418 (48%), Positives = 256/418 (61%), Gaps = 80/418 (19%)
Query: 1 MNLEIEQLDVKTVFLHGDLEEVVYMEQPTEFEVKGKEHLICKLDKSLYGLKQAPRQWHKK 60
++LEIEQ+DVKT FLHGDL++ +YMEQ F +KGKE CKL KSLYGLKQAPRQW+KK
Sbjct: 393 LDLEIEQMDVKTTFLHGDLDKEIYMEQLEGFIIKGKEDYACKLKKSLYGLKQAPRQWYKK 452
Query: 61 FESFMKDQGYHRTASDHCVFVHKFPDGDLIILLLYVDDMLIVGQDANKISRLKKELNKYF 120
FES M +QGY +T S+HCVFVHKF D D +ILLLYVDD+LIVG++ ++I +LKK+L+K F
Sbjct: 453 FESVMGEQGYKKTTSNHCVFVHKFSDDDFVILLLYVDDILIVGRNVSRIDKLKKQLSKSF 512
Query: 121 DMKDWGPAKQILGTHISHYRKAGKLCLSQERYIEKVLERFNMNKTKLVSCPLASHFKLTR 180
MKD GP K+ILG I R + KL +SQE+YIEKVLERFNM+K K+V+ PLASHFKL+R
Sbjct: 513 SMKDLGPVKKILGIRIERDRASKKLYMSQEQYIEKVLERFNMSKAKVVNSPLASHFKLSR 572
Query: 181 DQCPSTRSEKEEIEKITYASVVESLMYAMV------------------------WGAVSW 216
PS EKE++ ++ YAS V SLM MV W AV W
Sbjct: 573 RHSPSIDKEKEDMRRVPYASAVGSLMNPMVCTRPDIAYVIGVVSRFLSNPGRLHWEAVKW 632
Query: 217 -------QSKLQ------KCVALSNTEAEYIA------------ITECCKDMLWVKRL-- 249
SKL+ K V +S T++ +T + W RL
Sbjct: 633 IMRYLQGTSKLKLTFESGKPVLVSYTDSNMAGDVDNRRPTLGYLMTFSGGAVFWQSRLQK 692
Query: 250 ---------------------------LEELGMKQDNYVIHCDSQSAINLSKNSSFHSKS 282
+ ELG KQ YV++CD+QS I+LSKNS FH++S
Sbjct: 693 SVALSTTEAEYIAAAEACKELLWMKRFIHELGFKQQRYVVYCDNQSVIHLSKNSIFHARS 752
Query: 283 KHINVRYQWIQDVLEEKVLKIEKIHTDDNGSDMMTKPLPKCKHELCSSVAGLEMVGPS 340
KHI+VRY W++D L + + ++EKIH D NGSDM+TK LPK K E+C S+A EM PS
Sbjct: 753 KHIDVRYHWMRDALNDNLFELEKIHIDHNGSDMLTKSLPKEKLEVCCSIA--EMASPS 808