BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1850.1
(128 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP59118.1 Retrovirus-related Pol polyprotein from transposon TN... 182 2e-55
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 194 5e-55
CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera] 194 5e-55
>KYP59118.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 277
Score = 182 bits (463), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 100/127 (78%)
Query: 1 LKCIRTDNRGKYIGSFEEYCKTHGIQHEQTIPKTPQQNGIADRMNRTIVERIRCMLSEAK 60
LKC+R +N G+Y G FE YC+ H I+ E+TIPKT Q NG+A+RMNRTI ++IRCMLS AK
Sbjct: 151 LKCVRENNGGEYRGPFEHYCRDHNIKLEKTIPKTLQHNGVAERMNRTINDKIRCMLSHAK 210
Query: 61 LPKIFWGEAMRIVCYLINLSPSTPLDGDVAERVWDEKEDSYEHLRVFGCRAFVHIPKDQR 120
LPK FWG+ +RIV LINLSP PLD DV +RVW K SY HLRVFGC+A VHIPKD+R
Sbjct: 211 LPKAFWGDVLRIVVDLINLSPCVPLDNDVLKRVWRGKNVSYSHLRVFGCKALVHIPKDER 270
Query: 121 TKLDDKT 127
TKLD K+
Sbjct: 271 TKLDSKS 277
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 194 bits (492), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 103/128 (80%)
Query: 1 LKCIRTDNRGKYIGSFEEYCKTHGIQHEQTIPKTPQQNGIADRMNRTIVERIRCMLSEAK 60
LKCIRTDN G+Y+G FE YCKTHGI+HE+ PKTPQ NG+A+RMNRTI E++R MLS AK
Sbjct: 538 LKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHAK 597
Query: 61 LPKIFWGEAMRIVCYLINLSPSTPLDGDVAERVWDEKEDSYEHLRVFGCRAFVHIPKDQR 120
+PK FWGEA+ LINLSPS PL+G++ E VW K+ Y HL+VFGCRAFVHIPKD+R
Sbjct: 598 IPKSFWGEAVLTAADLINLSPSRPLNGEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDER 657
Query: 121 TKLDDKTK 128
TKLD K K
Sbjct: 658 TKLDAKVK 665
>CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 194 bits (492), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 109/128 (85%)
Query: 1 LKCIRTDNRGKYIGSFEEYCKTHGIQHEQTIPKTPQQNGIADRMNRTIVERIRCMLSEAK 60
LKCIRTDN G+Y G F+EYC+ HGI+H++T PKTPQ NG+A+RMNRT+VER+RC+LS+++
Sbjct: 409 LKCIRTDNGGEYSGPFDEYCRQHGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQ 468
Query: 61 LPKIFWGEAMRIVCYLINLSPSTPLDGDVAERVWDEKEDSYEHLRVFGCRAFVHIPKDQR 120
LP+ FWGEA+ V +++NL+P PL+ DV +R+W E SY+HLRVFGC+AFVHIPKD+R
Sbjct: 469 LPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDER 528
Query: 121 TKLDDKTK 128
+KLD KT+
Sbjct: 529 SKLDAKTR 536