BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1860.1
(150 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN81755.1 hypothetical protein VITISV_020922 [Vitis vinifera] 88 4e-18
CAN77158.1 hypothetical protein VITISV_019025 [Vitis vinifera] 84 4e-16
CDX94572.1 BnaC09g22640D [Brassica napus] 74 1e-12
>CAN81755.1 hypothetical protein VITISV_020922 [Vitis vinifera]
Length = 310
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Query: 33 LLNEETRRISSADESHSEALVIERRGRGKSRKP---HNRDKSRGRSEPKKEVRCFGCGKM 89
+ NEE +R S++EA VIERRGR K+RKP +NRDKSRG+S +KE++CF GK
Sbjct: 6 MFNEEAKRKELGISSNTEAPVIERRGRSKNRKPSSDYNRDKSRGKSNSRKEIKCFYYGKP 65
Query: 90 SHYNSDCRKPKKENKKDD-----ENQDNIAAVASSDDIILLSGCGDTCLSM 135
H +CRK KKE K + E++D IA VAS+ D I++ C D C+++
Sbjct: 66 GHIKRECRKFKKEQFKGNGEVQKEDKD-IAVVASNADTIIV--CDDACVNL 113
>CAN77158.1 hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 8/110 (7%)
Query: 33 LLNEETRRISSADESHSEALVIERRGRGKSRKP---HNRDKSRGRSEPKKEVRCFGCGKM 89
+ NEE +R S++EALV ERRGR KSRKP +N DKSRG+S+ +K+++C C K
Sbjct: 47 MFNEEAKRKKLGISSNTEALVTERRGRSKSRKPSSDYNCDKSRGKSKSQKDIKCLYCDKP 106
Query: 90 SHYNSDCRKPKKEN--KKDDENQD--NIAAVASSDDIILLSGCGDTCLSM 135
H +CRK K+E +K +E +D +IAAVAS+ D I + C D C+++
Sbjct: 107 GHIKRECRKFKREQFKRKGEEQKDDKDIAAVASNGDTINIV-CDDACVNL 155
>CDX94572.1 BnaC09g22640D [Brassica napus]
Length = 541
Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 33 LLNEETRRISSADESHSEALVIERRGRGKSR---KPHNRDKSRGRSEPKKEVRCFGCGKM 89
LLNEE RR S+SEA +++RRGR ++R + RD+SRGRS+ + V C+ CGK
Sbjct: 8 LLNEEVRRKERGSSSYSEANIVDRRGREETRGQNRSRGRDQSRGRSKSRPRVTCYYCGKP 67
Query: 90 SHYNSDCRKPKKENKKDDENQDNIAAVASSDD 121
H S+CR KK+ + + D + +D
Sbjct: 68 DHMKSECRFFKKDKQAGNIKPDWLNTTKKHED 99