BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2110.1
(126 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU39079.1 hypothetical protein TSUD_321500 [Trifolium subterran... 64 2e-09
XP_010687205.1 PREDICTED: uncharacterized protein LOC104901341 [... 62 2e-09
XP_010687034.1 PREDICTED: uncharacterized protein LOC104901178 [... 62 4e-09
>GAU39079.1 hypothetical protein TSUD_321500 [Trifolium subterraneum]
Length = 1548
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 2 KGREEILQVLIAKGKAELPKPNDDREEFGSRDMTAWCAFHRGYGHKTDNCRHLKNLIEEM 61
+ R +L ++ G A LP P G D AWCA+HR GH T+ C L++LIEE+
Sbjct: 296 RARAHVLHEILQAGLAPLPPPRMHNTIMGP-DTEAWCAYHRCKGHDTERCFCLRDLIEEL 354
Query: 62 VRKGELDKYIQ---------KEQQPYE--------NRNKRQ---VNRAGIGSGPEANEQG 101
+R G L K+++ +Q PY+ N+ ++Q VN +GS
Sbjct: 355 IRSGHLRKFLEDAAKGQIALPKQTPYQQKGEGDGRNKGEKQRVAVNTISVGSSTFPRTPE 414
Query: 102 LTF 104
++F
Sbjct: 415 ISF 417
>XP_010687205.1 PREDICTED: uncharacterized protein LOC104901341 [Beta vulgaris
subsp. vulgaris]
Length = 180
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%)
Query: 14 KGKAELPKPNDDREEFGSRDMTAWCAFHRGYGHKTDNCRHLKNLIEEMVRKGELDKYIQK 73
K + EL P + + + +RD + +C FH+ GH+T+ C+HLK +E++ RKG+++ YI +
Sbjct: 4 KDQYELKAPAEMKTPYKNRDKSKYCHFHKDCGHETNECKHLKRALEDLARKGKMNSYIPQ 63
Query: 74 EQQPYENRNKRQVNR 88
+ ++ ++ RQ R
Sbjct: 64 AVRKFQKKDNRQSRR 78
>XP_010687034.1 PREDICTED: uncharacterized protein LOC104901178 [Beta vulgaris
subsp. vulgaris]
Length = 308
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 11 LIAKGKAELPKPNDDREEFGSRDMTAWCAFHRGYGHKTDNCRHLKNLIEEMVRKGELDKY 70
L KGK LPKP R F RD WC FH +GH T CR LK ++++ +G+L++Y
Sbjct: 175 LDIKGKYPLPKPYPIRTSFNKRDKKVWCEFHHDFGHTTRECRELKRALDKLADEGKLNRY 234
Query: 71 IQKEQQPYENR 81
+ + P EN+
Sbjct: 235 M---KDPKENK 242