BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2150.1
(109 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP42039.1 Retrovirus-related Pol polyprotein from transposon TN... 159 2e-45
CAN66775.1 hypothetical protein VITISV_035302 [Vitis vinifera] 162 1e-44
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 159 1e-44
>KYP42039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 159 bits (402), Expect = 2e-45, Method: Composition-based stats.
Identities = 70/109 (64%), Positives = 84/109 (77%)
Query: 1 MSRVPYANAVGSIMYVMVCTRPDNSLVVSVVSRYMGRPERGHWQDVKWILRYLGGTAELG 60
MS VPYA+AVGS+MY MVCTRPD + VS+VSRYM P + HW VKWI RYL GT+ +G
Sbjct: 169 MSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIG 228
Query: 61 LVYDRRADTSYSVVGFVDLDFSGDLDRKRSLTGYTFTLCGSVISWRAVL 109
LV+DR T+ +V GFVD D+ GDLDR+RSL+GY FTLC S ISW+A L
Sbjct: 229 LVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASL 277
>CAN66775.1 hypothetical protein VITISV_035302 [Vitis vinifera]
Length = 734
Score = 162 bits (411), Expect = 1e-44, Method: Composition-based stats.
Identities = 74/109 (67%), Positives = 87/109 (79%)
Query: 1 MSRVPYANAVGSIMYVMVCTRPDNSLVVSVVSRYMGRPERGHWQDVKWILRYLGGTAELG 60
MS VPYA+ VGSIMYVMVCTR + S VSVVSRYM PE+ HWQ VKWILR+L GT+ +G
Sbjct: 582 MSHVPYASTVGSIMYVMVCTRLEKSHAVSVVSRYMDHPEKIHWQAVKWILRHLRGTSHVG 641
Query: 61 LVYDRRADTSYSVVGFVDLDFSGDLDRKRSLTGYTFTLCGSVISWRAVL 109
LVYD+ D S +VG+VD D+ GDLDR+RSLT Y FTLCG+VISW+A L
Sbjct: 642 LVYDKNFDISRGIVGYVDFDYVGDLDRRRSLTRYVFTLCGNVISWKATL 690
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 159 bits (403), Expect = 1e-44, Method: Composition-based stats.
Identities = 70/109 (64%), Positives = 84/109 (77%)
Query: 1 MSRVPYANAVGSIMYVMVCTRPDNSLVVSVVSRYMGRPERGHWQDVKWILRYLGGTAELG 60
MS VPYA+AVGS+MY MVCTRPD + VS+VSRYM P + HW VKWI RYL GT+ +G
Sbjct: 278 MSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIG 337
Query: 61 LVYDRRADTSYSVVGFVDLDFSGDLDRKRSLTGYTFTLCGSVISWRAVL 109
LV+DR T+ +V GFVD D+ GDLDR+RSL+GY FTLC S ISW+A L
Sbjct: 338 LVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASL 386