BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2180.1
(192 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP53356.1 Retrovirus-related Pol polyprotein from transposon TN... 264 2e-83
KYP57305.1 Retrovirus-related Pol polyprotein from transposon TN... 265 2e-83
CAN81354.1 hypothetical protein VITISV_003396 [Vitis vinifera] 254 8e-83
>KYP53356.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 264 bits (674), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 152/189 (80%)
Query: 4 FSPVVKHSSIRLLLAMVALYDMELEQLDVKIAFLHGELEEQIYMRQPEGFEILGKEDEVC 63
FSPVV+H+SIR+LLA VAL+D+ELEQLDVK AFLHGELEE+IYM QPEGF + KE VC
Sbjct: 67 FSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVC 126
Query: 64 LLKKPLYGLEQSPRQWYKRLDTFMVKNSYDRSRYDSCVYHRKLSDGSYVYLLLYVDDMLI 123
LKK LYGL+Q+PRQWYK+ D+FM+ Y RS+YD C+Y ++ DG+++YLLLYVDDMLI
Sbjct: 127 QLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLI 186
Query: 124 ACKDMSEIHVLKDQLKGEFETKDLGASRKILGMEIRRNRCAGKLFLSQKMYIEKVLERFV 183
A +D S I LK QL EFE K+LGA++KILGMEI R+R GKLFLSQ+ YIE++L+RF
Sbjct: 187 ASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFN 246
Query: 184 MTEAKPVGT 192
M KPV T
Sbjct: 247 MNNCKPVST 255
>KYP57305.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 265 bits (676), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 153/189 (80%)
Query: 4 FSPVVKHSSIRLLLAMVALYDMELEQLDVKIAFLHGELEEQIYMRQPEGFEILGKEDEVC 63
FSPVVKH +IR+LLAMV+ DM+LEQL+VKIAFLHG LEEQ+YM QP+GF +GK++ VC
Sbjct: 278 FSPVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVC 337
Query: 64 LLKKPLYGLEQSPRQWYKRLDTFMVKNSYDRSRYDSCVYHRKLSDGSYVYLLLYVDDMLI 123
LLKK LYGL+QSPRQWYKR D FM+ ++ R+ +D+CVY RKLSDGSY+YLLLYVDDMLI
Sbjct: 338 LLKKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLI 397
Query: 124 ACKDMSEIHVLKDQLKGEFETKDLGASRKILGMEIRRNRCAGKLFLSQKMYIEKVLERFV 183
A K ++I LK L EFE KDLG ++KILGMEI R+R AG L++SQK YIEK+L+ F
Sbjct: 398 AAKSKTDIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQ 457
Query: 184 MTEAKPVGT 192
M +KPV T
Sbjct: 458 MENSKPVST 466
>CAN81354.1 hypothetical protein VITISV_003396 [Vitis vinifera]
Length = 252
Score = 254 bits (649), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 125/177 (70%), Positives = 146/177 (82%), Gaps = 3/177 (1%)
Query: 19 MVALYDMELEQLDVKIAFLHGELEEQIYMRQPEGFEILGKEDEVCLLKKPLYGLEQSPRQ 78
MVAL+D+++EQLDVKIAFLHGELEEQIYM QPEGF I GKE+ VCLLKK LYGL+QSPRQ
Sbjct: 1 MVALFDLKVEQLDVKIAFLHGELEEQIYMHQPEGFIISGKENHVCLLKKSLYGLKQSPRQ 60
Query: 79 WYKRLDTFMV---KNSYDRSRYDSCVYHRKLSDGSYVYLLLYVDDMLIACKDMSEIHVLK 135
WYKR TFM+ N Y RS YD+CVYH+KL DGS++YLLLYVDDMLIA K+M EI++ K
Sbjct: 61 WYKRFVTFMIGNESNDYHRSEYDNCVYHKKLFDGSFIYLLLYVDDMLIAYKNMFEINMSK 120
Query: 136 DQLKGEFETKDLGASRKILGMEIRRNRCAGKLFLSQKMYIEKVLERFVMTEAKPVGT 192
QL+ EFE KDLG ++KILGMEI R++ GKL+LSQK YIEKVLERF M KP+G
Sbjct: 121 TQLQREFEMKDLGTAKKILGMEIHRDQKVGKLYLSQKNYIEKVLERFGMQGLKPLGA 177