BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2200.1
(106 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 147 6e-40
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 143 1e-37
XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [... 131 3e-36
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 147 bits (372), Expect = 6e-40, Method: Composition-based stats.
Identities = 65/105 (61%), Positives = 85/105 (80%)
Query: 2 VLEINACFAEDRWILDTGCTFYVCPHKEWFSTYTAINGGKVLMGNNAPCKVVGIGTIQIK 61
VL +NA + D WILD+G ++++CP+K+ F TY +GG VLMGNNAP K +GIG+I+IK
Sbjct: 273 VLSVNAVRSNDEWILDSGYSYHMCPYKDRFHTYEHDDGGVVLMGNNAPRKTIGIGSIRIK 332
Query: 62 THDGVVRTITDIRHVPDLKRNLISLGTLVDNGCKYTGEGGVLRIS 106
+DG+VRT+T +RHV DLK+NLISLGTL NGCKY+ EGGVLR+S
Sbjct: 333 MYDGIVRTLTQVRHVLDLKKNLISLGTLEANGCKYSAEGGVLRVS 377
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 143 bits (360), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/97 (59%), Positives = 80/97 (82%)
Query: 10 AEDRWILDTGCTFYVCPHKEWFSTYTAINGGKVLMGNNAPCKVVGIGTIQIKTHDGVVRT 69
++ WILD+GCTF++CP+K+ F+T ++ G VLMGN+ CK+ GIGTIQIKTHDG ++T
Sbjct: 283 SKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKT 342
Query: 70 ITDIRHVPDLKRNLISLGTLVDNGCKYTGEGGVLRIS 106
++++R +PDLKRNLISLGTL GCKY+ EGGVL++S
Sbjct: 343 LSNVRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVS 379
>XP_016192411.1 PREDICTED: uncharacterized protein LOC107633284 [Arachis ipaensis]
Length = 215
Score = 131 bits (329), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 74/90 (82%)
Query: 12 DRWILDTGCTFYVCPHKEWFSTYTAINGGKVLMGNNAPCKVVGIGTIQIKTHDGVVRTIT 71
D+WILD+G + ++CP+++WF+TY +INGG VLMGN+ CK VG+GT++IK HDGVVRT+
Sbjct: 125 DKWILDSGASHHMCPNRKWFTTYESINGGTVLMGNDHACKAVGLGTVRIKMHDGVVRTLK 184
Query: 72 DIRHVPDLKRNLISLGTLVDNGCKYTGEGG 101
D+RH+PDL++NLIS+G L NGCK + G
Sbjct: 185 DVRHIPDLRKNLISIGLLEKNGCKIVAKMG 214