BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2230.1
(146 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010668234.1 PREDICTED: uncharacterized protein LOC104885229 [... 116 1e-27
XP_007023888.1 DNA/RNA polymerases superfamily protein [Theobrom... 114 6e-27
CAN66189.1 hypothetical protein VITISV_006047 [Vitis vinifera] 114 1e-26
>XP_010668234.1 PREDICTED: uncharacterized protein LOC104885229 [Beta vulgaris
subsp. vulgaris]
Length = 1321
Score = 116 bits (291), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Query: 1 MRQRRRLELMKDYDFSMQYHLGKANVVADALSRQSRGIIAALMMNQWKMWEDVETYDIDM 60
MRQRR LELMKDYD +QYH GKAN VADALSR R ++ +L+ +++E+ + D+++
Sbjct: 810 MRQRRWLELMKDYDMEIQYHPGKANKVADALSRGPRRVVNSLLSLPHELYEEFQRLDLNV 869
Query: 61 VRSGVDSLFLGSMVVRPSLLNRIVDAQVNDEW-CQKQVSLMQETETEFSTGQDGGLRFRG 119
V+ GV L + +PSL + I + Q DE+ + + + + +EF G+DG +R +G
Sbjct: 870 VKRGVPQESLNVLTTQPSLCDEIREKQGRDEFLAEIRAKIGRGEPSEFHLGEDGSIRLKG 929
Query: 120 RLLVPADPVLRLDILDEAH 138
+ VP DP L+ IL+EAH
Sbjct: 930 QWCVPEDPALKEKILEEAH 948
>XP_007023888.1 DNA/RNA polymerases superfamily protein [Theobroma cacao]
EOY26510.1 DNA/RNA polymerases superfamily protein
[Theobroma cacao]
Length = 1290
Score = 114 bits (286), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 1 MRQRRRLELMKDYDFSMQYHLGKANVVADALSRQSRGIIAALMMNQWKMWEDVETYDIDM 60
+RQRR LEL+KDYD + YH GKANVV DALSR+S +A L + + M ++++ I +
Sbjct: 757 LRQRRWLELIKDYDLVIDYHPGKANVVTDALSRKSSSSLATLRSSYFPMLLEMKSLGIQL 816
Query: 61 VRSGVDSLFLGSMVVRPSLLNRIVDAQVNDEWCQKQVSLMQETE-TEFSTGQDGGLRFRG 119
+G D L S VVRPSLLN+I + Q D+W +++V +Q+ E +EF DG L R
Sbjct: 817 -NNGEDGTLLASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGEASEFRLSDDGTLMLRD 875
Query: 120 RLLVPADPVLRLDILDEAH 138
R+ VP D LR IL+EAH
Sbjct: 876 RICVPKDDQLRRAILEEAH 894
>CAN66189.1 hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 114 bits (284), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 2 RQRRRLELMKDYDFSMQYHLGKANVVADALSRQSRGIIAALMMNQWKMWEDVETYDIDMV 61
RQRR +E ++DYDF++ YH GKANVVADALSR+S G + +L + +++M+ +E +++ +V
Sbjct: 1066 RQRRWMETLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLREFEMYAVIEDFELCLV 1125
Query: 62 RSGVDSLFLGSMVVRPSLLNRIVDAQVNDEWCQKQVS--LMQETETEFSTGQDGGLRFRG 119
+ G L S+ RP ++ RIV+AQV+DE+ +K + + E + +S +DG +RF+G
Sbjct: 1126 QEGRGPC-LYSISARPMVIQRIVEAQVHDEFLEKVKAQLVAGEIDENWSMYEDGSVRFKG 1184
Query: 120 RLLVPADPVLRLDILDEAHQ 139
RL VP D LR ++L +AH+
Sbjct: 1185 RLCVPKDVELRNELLADAHR 1204