BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2250.1
(199 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 181 1e-53
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 180 5e-49
KYP63671.1 Retrovirus-related Pol polyprotein from transposon TN... 166 8e-48
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 181 bits (459), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 139/237 (58%), Gaps = 46/237 (19%)
Query: 2 AKYEIENFDGSNDFNLWKIKIRAVLVQQGLLKTLNGKAALTESLSEAEMEDLMERAHGQI 61
KYEIE F+G NDF+LW++K+ A+LVQQGLLK L GK L +LS++E +DLME+AH I
Sbjct: 6 TKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAI 65
Query: 62 LLCLSKEVLREVATKTTANGLW----------------------------------NHMD 87
LL LS EVLREV + +A +W H+D
Sbjct: 66 LLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHID 125
Query: 88 ELNRVFLDLANLDVRFEDEDKVVLLLASLRSSYESFVDSFMSGKTTTTFEDVKETLNSKE 147
E NRV LDL N+DV+ EDED ++LL L SYE+FVD+ + G+ T TFEDV+ LNSKE
Sbjct: 126 EFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSKE 185
Query: 148 VRRR--SMEESSSGDGWVV-RGRSQHVVDGKSRSL---SKSKPKKYRCFNCKKEGHF 198
++++ + + +G VV RGR GK + L KS+ K C+NC ++GHF
Sbjct: 186 LKKKVGGIRNENQAEGLVVNRGR------GKEKGLDKKGKSRAKGKTCWNCGQKGHF 236
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 180 bits (456), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 139/237 (58%), Gaps = 46/237 (19%)
Query: 2 AKYEIENFDGSNDFNLWKIKIRAVLVQQGLLKTLNGKAALTESLSEAEMEDLMERAHGQI 61
KYEIE F+G NDF+LW++K+RA+LVQQGLLK L GK L +LS+ E +DLM++AH I
Sbjct: 128 TKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVI 187
Query: 62 LLCLSKEVLREVATKTTANGLW----------------------------------NHMD 87
LL LS EVLREV + +A +W H+D
Sbjct: 188 LLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHID 247
Query: 88 ELNRVFLDLANLDVRFEDEDKVVLLLASLRSSYESFVDSFMSGKTTTTFEDVKETLNSKE 147
E NRV LDL N+DV+ EDED ++LL L SYE+FVD+ + G+ T TFEDV+ +LN KE
Sbjct: 248 EFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFKE 307
Query: 148 VRRR--SMEESSSGDGWVV-RGRSQHVVDGKSRSL---SKSKPKKYRCFNCKKEGHF 198
++++ + + +G VV RGR GK + L KS+ K C+NC ++GHF
Sbjct: 308 LKKKVGGIRNENQAEGLVVNRGR------GKEKGLDRKGKSRAKGKTCWNCGQKGHF 358
>KYP63671.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 268
Score = 166 bits (419), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 39/235 (16%)
Query: 3 KYEIENFDGSNDFNLWKIKIRAVLVQQGLLKTLNGKAALTESLSEAEMEDLMERAHGQIL 62
K++I+ F+GSNDF LWK+K++AVLV QG L G L +++ E + ++E+AH IL
Sbjct: 5 KFDIDKFNGSNDFTLWKLKMKAVLVHQGCAAALEGADKLPIIMTDDEKKAMLEKAHSLIL 64
Query: 63 LCLSKEVLREVATKTTANGLW----------------------------------NHMDE 88
L L+ EVLREV +TTA G+W +H+D
Sbjct: 65 LSLTDEVLREVGEETTAAGMWKMLEDKFQQKFLTNRLYQKQRLYTLQMSENMSVRDHLDN 124
Query: 89 LNRVFLDLANLDVRFEDEDKVVLLLASLRSSYESFVDSFMSGKTTTTFEDVKETLNSKEV 148
NR+ LDL ++ V+ +DED V++LL SL SYE+F+D+ + G+ + T +VK++L SKE+
Sbjct: 125 FNRIILDLQSIGVKVDDEDLVIILLCSLPKSYENFIDTMLYGRDSITLNNVKDSLQSKEL 184
Query: 149 RRRSMEESSSGDGWVV--RGRSQ---HVVDGKSRSLSKSKPKKYRCFNCKKEGHF 198
+RR + S++ D + RGRS + G +RS S SK KK RC+ CK+ GH
Sbjct: 185 KRRVVSSSNADDVGLTASRGRSTERGNSSKGHTRSNSLSKSKKARCYKCKEVGHI 239