BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2360.1
(648 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002311749.2 RNA-binding family protein [Populus trichocarpa] ... 528 e-178
OAY34430.1 hypothetical protein MANES_12G019700 [Manihot esculenta] 529 e-178
XP_016497869.1 PREDICTED: protein terminal ear1 homolog [Nicotia... 528 e-177
>XP_002311749.2 RNA-binding family protein [Populus trichocarpa] EEE89116.2
RNA-binding family protein [Populus trichocarpa]
Length = 583
Score = 528 bits (1359), Expect = e-178, Method: Compositional matrix adjust.
Identities = 309/589 (52%), Positives = 375/589 (63%), Gaps = 71/589 (12%)
Query: 1 MEETG-IRFPAGYLLDPRAEEFRPGNHSPENQFTLVTP-----------------QIYYP 42
MEE G ++FP LDPRA+EFRP + N P Q+YY
Sbjct: 1 MEENGSVQFPGN--LDPRAQEFRPRRDNLHNFSPKFLPFGPPPPPPPPPPPQLPHQVYYT 58
Query: 43 YHPSIFPPPSGSSTGSVQMMSFYDGGLGYQQQPTSATAYVSSTAAQISSNSPWPPISTTA 102
Y P P G VQ YD + AYVS P PP+ T
Sbjct: 59 YTPQALP--FSDFVGFVQ----YDHHI--------PPAYVSV--------EPLPPLPPTG 96
Query: 103 --TRVLLLTSVPREVTEVMVRRDMEIFGEVRAVQMERLHQDGIVTVHFYDLRHAQVAVKE 160
TR L+L+SVP EV E ++RR++E+FGEVR VQMER+ G VTVHFYDLRHA+ A++E
Sbjct: 97 APTRTLVLSSVPSEVNESLIRRELEVFGEVRGVQMERVGY-GTVTVHFYDLRHAERALRE 155
Query: 161 IQEQHMQQQLRSRLHYMNYCYSVQM-VAPPPPPPPPGPGLIAGRVVWAQFTIPGSLPGHG 219
I+EQHM Q R R ++ S+ +AP PPPP G+IAG VVWAQF IP
Sbjct: 156 IREQHMLHQARLRNFFIQNSESISFNIAPTPPPP--ARGVIAGCVVWAQFIIPSCNEVPD 213
Query: 220 GRNQGTIVIFNLDSGVSEVKLREIFEAFGDVKELRKTPSKRNQRFVEYYDIRDAAKALSE 279
G+NQGT+V+FNLD VS L+EIF+AFG VKE+R+TP KR+QRF+E+YD+RDAAKAL E
Sbjct: 214 GQNQGTLVVFNLDPNVSTRSLKEIFQAFGAVKEVRETPLKRHQRFIEFYDVRDAAKALRE 273
Query: 280 MNGREINGKCILIEFSRPGGQNKIKIKFSDQQKQQQEEEEKI--MIDSVSSL--SLVGCD 335
MNG+EI GK + IEFSRPGG K KF + + + + + DS ++L S
Sbjct: 274 MNGKEIYGKQVDIEFSRPGGHGK---KFFNARPRATSKNSFTTPVFDSTTNLRHSKKPSG 330
Query: 336 DQGNNNFSNASVSKKNTGKKKKKKKKNNGEKLTERKQLMRSRSWKSGSSSSGSSSRQKGL 395
D N AS+ + + G + KQ ++SWK S + K L
Sbjct: 331 DPSEGNPIEASI-------EASLGCLSLGGDVIVGKQQKSAKSWKG-------SRQAKKL 376
Query: 396 GSNFLIDEAAIMESNFIRDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQINDGDDQP 455
S FLI + +++E++ D+RTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQI +GDDQP
Sbjct: 377 DSRFLISDESMVETSG-SDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIANGDDQP 435
Query: 456 LSSYDFLYLPIDFNNKCNVGYGFVNLTSPQAAWRLYKAFHLQPWEVFNSRKICEVTYARL 515
LSSYDFLYLPIDFNNKCNVGYGFVN+TSPQAAWRLYKAFH Q WEVF+SRKIC VTYAR+
Sbjct: 436 LSSYDFLYLPIDFNNKCNVGYGFVNMTSPQAAWRLYKAFHNQHWEVFSSRKICAVTYARV 495
Query: 516 QGLEALKEHFKNSKFACETEDYLPVVFSPPRDGKCQLTEPLVMGGQAAD 564
QGLEALKEHFKNSKF CE + +LPVVFSPPRDG+ Q TEPL + G D
Sbjct: 496 QGLEALKEHFKNSKFPCEMDHHLPVVFSPPRDGR-QQTEPLPIIGHKHD 543
>OAY34430.1 hypothetical protein MANES_12G019700 [Manihot esculenta]
Length = 663
Score = 529 bits (1362), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/693 (47%), Positives = 403/693 (58%), Gaps = 113/693 (16%)
Query: 1 MEETGI-RFPAGYLLDPRAEEFRPGNHSPENQFTLVTP----------------QIYYPY 43
M ETGI RFP LDPRA+EFRP N+ FT P Q+YY Y
Sbjct: 1 MGETGIVRFPGN--LDPRAQEFRPRNNPNNVNFTQRMPLFGPPPLPPPPPPTPHQVYYTY 58
Query: 44 HPSIFPPPSGSSTGSVQMMSFYDGGL-GYQQQPTSAT-AYVSSTAAQISSNSPWPPISTT 101
+ Q + F D G+ GY Q P++A AYVS+ P PP S
Sbjct: 59 -------------AAPQAVPFTDDGVVGYPQYPSAAPPAYVSTVL-------PLPPQSAA 98
Query: 102 ATRVLLLTSVPREVTEVMVRRDMEIFGEVRAVQMERLHQDGIVTVHFYDLRHAQVAVKEI 161
TR L+L+SVP +V+E ++RR++E+FGEVR VQME++ + GIVTVHFYDLRHA+ A+++I
Sbjct: 99 PTRTLVLSSVPSDVSESIIRRELEVFGEVRGVQMEKICE-GIVTVHFYDLRHAEKALQDI 157
Query: 162 QEQHMQQQLRSRLHYMNYCYSVQMVAPP----PPPPPPGPGLIAGRVVWAQFTIPGSLPG 217
++QHM+QQ R + S + PP P GLI+G VWAQF IP
Sbjct: 158 RDQHMRQQSRLGNLFATLERSSGFIGLGEKLFAPPSPAARGLISGCAVWAQFIIPSCNAV 217
Query: 218 HGGRNQGTIVIFNLDSGVSEVKLREIFEAFGDVKELRKTPSKRNQRFVEYYDIRDAAKAL 277
G NQGTIV+FNLD VS L+EIF+AFG VKELR+TP K+ QRFVE+YDIRDAAKAL
Sbjct: 218 PDGHNQGTIVVFNLDPNVSTSSLKEIFQAFGSVKELRETPLKKQQRFVEFYDIRDAAKAL 277
Query: 278 SEMNGREINGKCILIEFSRPGGQNK--------------------IKIKFS--------- 308
EMNG+EI+GK ++IEFSRPGG + I K S
Sbjct: 278 REMNGKEIHGKPVVIEFSRPGGYGRRFFNATPTSSSKTSSISNAFISTKISRYASPQPPP 337
Query: 309 DQQKQQQEEEEKIMIDSVSSLSLVGCDDQGNNNFSNASVSKKNTGKKKKKKKK----NNG 364
K SV + S Q ++ AS K K+ K N G
Sbjct: 338 PPPPPPPPMPRKFFSPSVPNASPCASLPQTQSSTKKASHFSKGNPKENVNDKGCLTINRG 397
Query: 365 EKLTERKQL----MRSRSWKSGSSSSGSSSRQ------------KGLGSNFLIDEAAIME 408
++ ++ ++ S KS + S +S++Q K + FLI+E A+ME
Sbjct: 398 DEDGVVDKVGDGPVKRNSKKSQNESCPTSTKQQHRNRPWKSRQAKKFDTRFLINEGAMME 457
Query: 409 SNFIRDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQINDGDDQPLSSYDFLYLPIDF 468
SN D+RTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQI +G+DQPLSSYDF+YLPIDF
Sbjct: 458 SN-SSDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIANGEDQPLSSYDFVYLPIDF 516
Query: 469 NNKCNVGYGFVNLTSPQAAWRLYKAFHLQPWEVFNSRKICEVTYARLQGLEALKEHFKNS 528
NNKCNVGYGFVN+TSPQA WRLYKAF+ Q WEVFNSRKICEVTYAR+QGLEALKEHFKNS
Sbjct: 517 NNKCNVGYGFVNMTSPQATWRLYKAFNHQHWEVFNSRKICEVTYARVQGLEALKEHFKNS 576
Query: 529 KFACETEDYLPVVFSPPRDGKCQLTEPLVMGGQAADGELRIKKCQRKVVDDDGDGNSNGG 588
KF CE E YLPVVF+PPRDG+ QLTEP + GQ + + + D D NS
Sbjct: 577 KFPCEMEHYLPVVFAPPRDGR-QLTEPQPIVGQKQQHPMIL-----GLPMDSTDHNSKNN 630
Query: 589 GGDGS-----------SSGGGGDGNDEGGSGSS 610
GD S G D D+G +G S
Sbjct: 631 NGDADREEDDEISNRRRSRNGSDEEDKGSNGGS 663
>XP_016497869.1 PREDICTED: protein terminal ear1 homolog [Nicotiana tabacum]
Length = 666
Score = 528 bits (1360), Expect = e-177, Method: Compositional matrix adjust.
Identities = 316/597 (52%), Positives = 379/597 (63%), Gaps = 73/597 (12%)
Query: 14 LDPRAEEF---RPGNHSPENQFTLVTPQIYYPYHPSIFPPPSGSSTGSVQMMSFYDGGLG 70
LDPRA+EF P + P N L+ Q YYP +P P + Y +G
Sbjct: 11 LDPRAQEFIPRYPFHQPPNNSLPLLPNQFYYP----AYPCPPQLPPPLPPSLPPYGDDVG 66
Query: 71 YQQQPTSATAYVSSTAAQISSNSPWPPISTTATRVLLLTSVPREVTEVMVRRDMEIFGEV 130
Y Q + TAYVSS + P S+ ATR LLL+ VP EV+E +VRRD+E+FG+V
Sbjct: 67 YHQ--VTHTAYVSSNPPMPTPFLPP--PSSMATRTLLLSMVPVEVSESIVRRDLEVFGDV 122
Query: 131 RAVQMERLHQDGIVTVHFYDLRHAQVAVKEIQEQHMQQQLRSRLHYMNYCYSVQM----- 185
RAVQM RL ++GIVTVHFYDLRHA+ A+ EIQEQ+MQQQ R R HY YS M
Sbjct: 123 RAVQMGRL-REGIVTVHFYDLRHARAALIEIQEQNMQQQCRLRRHYEESIYSTTMGGLIL 181
Query: 186 VAPPPPPPPPGPGLIAGRVVWAQFTIP--GSLPGHGGRNQGTIVIFNLDSGVSEVKLREI 243
P P PPP GLIAGR VWAQFT P SLP G NQGT+VIFNLDS S LR+I
Sbjct: 182 PPLPFPLPPPARGLIAGRAVWAQFTFPLTSSLPD--GNNQGTLVIFNLDSHTSSTYLRDI 239
Query: 244 FEAFGDVKELRKTPSKRNQRFVEYYDIRDAAKALSEMNGREINGKCILIEFSRPGG---- 299
F+AFG+VKELR+TP KR+QRFVE+YD+RDAA+AL+EMNG+EI+GK +LIEFSRPGG
Sbjct: 240 FQAFGNVKELRETPMKRHQRFVEFYDVRDAARALTEMNGKEIDGKQLLIEFSRPGGNSRR 299
Query: 300 ------------QNKIKIKFSDQQKQQQ------------------EEEEKIMIDSVSSL 329
+N I +S QK Q+ + DS++SL
Sbjct: 300 FSRPNYSSPKFSRNSINNNYSPPQKSQRVYTSHSQKSNYGNPSGSESSGSGSVQDSLASL 359
Query: 330 SLVGCDDQGNNNFSNASVSKKNTGKKKKKKKKNNGEKLTERKQLMRSRSWKSGSSSSGSS 389
+ +NN + T K ++ + ++ L++ +S K +
Sbjct: 360 CI-------SNNGRPGKIKNAKTCTKTISPSSSSVTTSSSKQILLQVKSNKPWKQARDYD 412
Query: 390 SRQKGLGSNFLIDEAAIMESNFIRDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIN 449
R FLI+E AIMESN DTRTTVMIKNIPNKYSQKLLLNMLDNHCIH NEQI
Sbjct: 413 PR-------FLINEDAIMESN-CSDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHYNEQIA 464
Query: 450 DGDDQ--PLSSYDFLYLPIDFNNKCNVGYGFVNLTSPQAAWRLYKAFHLQPWEVFNSRKI 507
DGDDQ P SSYDF+YLPIDF NKCNVGYGFVN+TSPQA RLYKAFH Q WEVFNSRKI
Sbjct: 465 DGDDQQQPKSSYDFVYLPIDFINKCNVGYGFVNMTSPQATLRLYKAFHHQSWEVFNSRKI 524
Query: 508 CEVTYARLQGLEALKEHFKNSKFACETEDYLPVVFSPPRDGKCQLTEPLVMGGQAAD 564
C+VTYARLQG+EALKEHFKNSKF CE E+Y+PV+FSPPRDGK LTE + + G+ +
Sbjct: 525 CQVTYARLQGIEALKEHFKNSKFPCEAEEYMPVIFSPPRDGKL-LTEAVPIVGRGMN 580