BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2520.1
(162 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010034647.1 PREDICTED: classical arabinogalactan protein 11-l... 57 1e-07
>XP_010034647.1 PREDICTED: classical arabinogalactan protein 11-like [Eucalyptus
grandis]
Length = 145
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 93/161 (57%), Gaps = 21/161 (13%)
Query: 4 KQIVVLALIFVAVVGSVSAAESPAKSPSSSPKSAPTKSKSAPAVSPAASDDDKSAATPAP 63
+Q+VVLALI AVVGSVSA E PA +P+++P +A P V+ ++ +A +
Sbjct: 3 RQLVVLALIIAAVVGSVSAQE-PAAAPTTTPSTA------VPPVA-SSPKASAAAPKASA 54
Query: 64 TDDESAAAAPKASAPTTSTASSPATSTPSDAPAGSDETSTLSSPPSPTPEAAAAGAGPVA 123
+++A+AP + AP S + P T S+ PA S +S L+SPP+P EA+ GPVA
Sbjct: 55 AAPQASASAPTSGAPEGSITNPPTT---SEGPAASSPSSDLASPPAPGSEAS---EGPVA 108
Query: 124 SDA---ADAPAPSDDAAKSDGSALKYSVVAGVTGVAAASFF 161
D ++APA A K+D S LK S +AGV VA A F
Sbjct: 109 DDGFSPSEAPA----AGKNDASTLKVSAIAGVAVVAGAFLF 145