BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2850.1
(258 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP34377.1 Retrovirus-related Pol polyprotein from transposon TN... 329 e-103
GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterran... 325 e-103
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN... 315 2e-99
>KYP34377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 938
Score = 329 bits (843), Expect = e-103, Method: Compositional matrix adjust.
Identities = 157/223 (70%), Positives = 183/223 (82%)
Query: 1 MKFPHWRDAMTKEIQALESNNTWSLVTLPHDKRPIGCKWVYKIKFKPDGSIDRYKARLVA 60
MK WR+AM KEIQALESNNTWSL LP K IGCKWVYKIK++ DGSI+RYKA LVA
Sbjct: 630 MKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKACLVA 689
Query: 61 KGYTQVEGLDYHDTFAPVAKLVTICVILSLAAIKHWPLHQLDVNNAFLQGDLDEEVYMKL 120
KGYTQ+EG+DYHDTFAPVAKLVT+ ++LS+AAIK+W LHQLDVNNAFLQGDL+EEVYMKL
Sbjct: 690 KGYTQIEGIDYHDTFAPVAKLVTVRLLLSIAAIKNWSLHQLDVNNAFLQGDLNEEVYMKL 749
Query: 121 PPGYSVHGENRVCRLNKSIYGLKQASRQWFSKFSSALVHKGFVQSLSDYSLFSYFKSNVI 180
PPG+S GE VC+L+KSIYGLKQASRQWFSKFS+ L+ +GF QS+SDYSLF+Y
Sbjct: 750 PPGFSRKGETYVCKLHKSIYGLKQASRQWFSKFSTTLIQRGFRQSISDYSLFTYISGQTS 809
Query: 181 IHVLVYVEDIIITGNNDLAISELKSGLGNVFSIKDLAHAESYL 223
+ VLVY++DIIITGNND AI +K L FSIKDL + +L
Sbjct: 810 VFVLVYIDDIIITGNNDDAIFNIKQFLAQSFSIKDLGNLRYFL 852
>GAU16220.1 hypothetical protein TSUD_298520 [Trifolium subterraneum]
Length = 801
Score = 325 bits (834), Expect = e-103, Method: Compositional matrix adjust.
Identities = 157/219 (71%), Positives = 179/219 (81%)
Query: 5 HWRDAMTKEIQALESNNTWSLVTLPHDKRPIGCKWVYKIKFKPDGSIDRYKARLVAKGYT 64
WR+AM KEIQALESNNTW L LP K IGCKWVYKIK+ DG+I+RYKARLVAKGYT
Sbjct: 400 EWREAMAKEIQALESNNTWVLCPLPEGKSAIGCKWVYKIKYHSDGTIERYKARLVAKGYT 459
Query: 65 QVEGLDYHDTFAPVAKLVTICVILSLAAIKHWPLHQLDVNNAFLQGDLDEEVYMKLPPGY 124
QV+G+DYHDTFAPVAKLVT+ +LS+AAIK+W LHQLDVNNAFLQGDL EEVYMKLPPG+
Sbjct: 460 QVQGIDYHDTFAPVAKLVTVRRLLSIAAIKNWSLHQLDVNNAFLQGDLGEEVYMKLPPGF 519
Query: 125 SVHGENRVCRLNKSIYGLKQASRQWFSKFSSALVHKGFVQSLSDYSLFSYFKSNVIIHVL 184
S G+ VC+LNKSIYGLKQASRQWFSKFS+ L+ KGF QS+SDYSLF+Y I VL
Sbjct: 520 SHKGKPCVCKLNKSIYGLKQASRQWFSKFSTTLIQKGFRQSISDYSLFTYICDQTTIFVL 579
Query: 185 VYVEDIIITGNNDLAISELKSGLGNVFSIKDLAHAESYL 223
VYV+DIIITGNN+ AI ++K L FSIKDL H +L
Sbjct: 580 VYVDDIIITGNNEDAILDIKQFLAQSFSIKDLGHLRYFL 618
>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 778
Score = 315 bits (808), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 151/223 (67%), Positives = 177/223 (79%)
Query: 1 MKFPHWRDAMTKEIQALESNNTWSLVTLPHDKRPIGCKWVYKIKFKPDGSIDRYKARLVA 60
MK WR+AM KEIQALESNNTWSL LP K IGCKWVYKIK++ DGSI+RYKARLVA
Sbjct: 344 MKSAEWREAMAKEIQALESNNTWSLCPLPQGKSSIGCKWVYKIKYRSDGSIERYKARLVA 403
Query: 61 KGYTQVEGLDYHDTFAPVAKLVTICVILSLAAIKHWPLHQLDVNNAFLQGDLDEEVYMKL 120
KGY Q+EG+DYHDTFAPVAKLV + ++LS+AAIK+W LHQLDVNN FLQGDL+EEVYMKL
Sbjct: 404 KGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVNNDFLQGDLNEEVYMKL 463
Query: 121 PPGYSVHGENRVCRLNKSIYGLKQASRQWFSKFSSALVHKGFVQSLSDYSLFSYFKSNVI 180
PP +S GE VC+L+K IYGLKQASRQWFSKFS+ ++ +GF QS+SDYSLF+Y
Sbjct: 464 PPRFSRKGETYVCKLHKFIYGLKQASRQWFSKFSTTIIQRGFRQSISDYSLFTYISGQTS 523
Query: 181 IHVLVYVEDIIITGNNDLAISELKSGLGNVFSIKDLAHAESYL 223
+ VLVYV+DIIIT NND AI +K L FSIKD + +L
Sbjct: 524 VFVLVYVDDIIITSNNDDAIFNIKQFLAQSFSIKDHGNLRYFL 566