BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2860.1
(171 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 130 2e-34
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 136 4e-34
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 132 1e-32
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 130 bits (328), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
Query: 10 SGKYEIEKFNGKNDFSYWRRQMKNLLISQKLQKTLMGKK--PGDMSDEDWEELDLEARAT 67
S KYEIEKFNG+NDFS WR +M LL+ Q L K L GK+ P ++SD + ++L +A +
Sbjct: 5 STKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSA 64
Query: 68 IMLCLERDVAFLVDGETTAASVWLKLESNFMTKTLTNRVYLKSKLFTCGMEEGSSIQEYV 127
I+L L +V V E +AA++W KLES ++TK+LTNR+Y+K +L+T M EG+S+ ++
Sbjct: 65 ILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHI 124
Query: 128 NRFDRIISNLKDIDVKL 144
+ F+R+I +LK+IDVK+
Sbjct: 125 DEFNRVILDLKNIDVKI 141
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 136 bits (342), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Query: 10 SGKYEIEKFNGKNDFSYWRRQMKNLLISQKLQKTLMGKK--PGDMSDEDWEELDLEARAT 67
S KYEIEKFNG+NDFS WR +M+ LL+ Q L K L GK+ P ++SD + ++L +A +
Sbjct: 127 STKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSV 186
Query: 68 IMLCLERDVAFLVDGETTAASVWLKLESNFMTKTLTNRVYLKSKLFTCGMEEGSSIQEYV 127
I+L L +V V E +AA+VW KLES +MTK+LTNR+Y+K +L+T M EG+S+ ++
Sbjct: 187 ILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHI 246
Query: 128 NRFDRIISNLKDIDVKL 144
+ F+R+I +LK+IDVK+
Sbjct: 247 DEFNRVILDLKNIDVKI 263
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 132 bits (331), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
Query: 12 KYEIEKFNGKNDFSYWRRQMKNLLISQKLQKTLMGK--KPGDMSDEDWEELDLEARATIM 69
K++IEKF+GK FS W+ QMK +L L+K L GK KP +M+DE W+ELD +A + I
Sbjct: 6 KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQ 65
Query: 70 LCLERDVAFLVDGETTAASVWLKLESNFMTKTLTNRVYLKSKLFTCGMEEGSSIQEYVNR 129
LCL ++V V ETTAA++WLKLES +MTK+L N++ LK +L+T M EG+ IQ ++N
Sbjct: 66 LCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNE 125
Query: 130 FDRIISNLKDIDVKL 144
F+ II +L++I++K+
Sbjct: 126 FNSIIMDLENIEIKI 140