BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2890.1
(651 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera] 632 0.0
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 616 0.0
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 593 0.0
>CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/677 (49%), Positives = 446/677 (65%), Gaps = 71/677 (10%)
Query: 2 SPHSSLDGGIPYEVRSGEHADYGRLKVFGCTTHYHVKGNKLDNRAKKAIFLGYASGVKGY 61
SP +++D P EV SG+ ++Y LK+FGC + HV KL+ RA K IFLGYA+GVKGY
Sbjct: 734 SPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGY 793
Query: 62 RLWCTEDK--KFVISRDVVFDESSIVAMAKATMPSCGDVGSTKAQVVEVEAEDQRVSRNH 119
RLWCTED+ KF+ISRDV FDES++ K GD+ T + +
Sbjct: 794 RLWCTEDRTPKFIISRDVTFDESAMFGQRK----EFGDLAGTSKTDLGA----------N 839
Query: 120 DQVEHQ-DSTQYEEIDEPDHEEVQGEGTQVLQQQQQDVSVHTRPKRLYKPVQRLGSDKPL 178
+VE + D+ +D+ E+ + Q Q ++ H RP+R + +P+
Sbjct: 840 QKVEFEVDAPMENGVDDTSEEQ-----PVIDQNDSQSIAAH-RPRREIR--------RPM 885
Query: 179 RYY-----GQANVVEYALSVEDD----EPVTFKQAITAEERESWLVAMQEEMESLHKNKT 229
RY N V +AL+V ++ EP ++K+A+ +++ + WL +M +EM SL KN+T
Sbjct: 886 RYVDCVSANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQT 945
Query: 230 WEVVPLPEGKSVIGCKWMYKKKEDSSEIKGTTYKARLMAKGYAQKEGVDYNEIFSPVMKH 289
WE+VPLPEG + CKW++K K+ S + YK+RL+AKG++QKEG+DYNE+FSPV+KH
Sbjct: 946 WELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKH 1005
Query: 290 TSIRVLLSIIAHSNLELEQLDVNTAFLHGDLEEEIYLAQPEGYRVEGKENQVCRLRKSLY 349
SIRVLL++++ NLEL+QLDV TAFLHG+LEEEIY+ QPEG+ K + VC L+KSLY
Sbjct: 1006 KSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLY 1065
Query: 350 GLKQSPRQWYKRFDFFMLKHGFRRSD-----YIKKLREGDFIYLLLYVDDMLIASRSMVE 404
GLKQSPRQWYKRFD FM+ H F R+ Y K L +G FIYLLLYVDDMLIA+++ E
Sbjct: 1066 GLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAE 1125
Query: 405 IDKLKSQLSQEFEMKDMGAAKKILGMEIKRERS------------------------IGS 440
I+KLK LS EFEMKD+GAAKKILGMEI R+R +GS
Sbjct: 1126 INKLKQLLSSEFEMKDLGAAKKILGMEIWRDRDAXLFTLPSTDEEVEYMKSVPYSSVVGS 1185
Query: 441 SMYAMVCTHLDISQTVSVVSWFMTNPGKTYCEAVKWVLRYLKGTVDTSLCFG-GD-TCQV 498
MYAMVCT D++ VSVVS FM+NPGK + EAVKW++RYLKG+ L +G GD + +
Sbjct: 1186 LMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSVCLVYGNGDVSSGL 1245
Query: 499 SGYVDSDYAGDLDRSRSTTGYVFRVHGAPVSWRSMLQSTVALSTTESEYMAMAEGVKEAL 558
G+ DSD+ GDL + RS T Y+F + G +SWR+ LQ TVALSTTE+EYM++ EGVKE +
Sbjct: 1246 VGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASLQPTVALSTTEAEYMSLTEGVKEGM 1305
Query: 559 WLWSLLDDLGIKQEFVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRDVIEKGDVSLM 618
WL L LG+ ++CDSQSA+ LAKN V+H RTKHIDVR +F+RDVIE+ S+
Sbjct: 1306 WLNGFLGSLGLNLSKPVIYCDSQSALCLAKNPVYHERTKHIDVRLNFIRDVIEEKLFSIE 1365
Query: 619 KVHTDENPADMLTKVVT 635
KV T+ NPADMLTK +T
Sbjct: 1366 KVATEVNPADMLTKPIT 1382
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 616 bits (1589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/720 (46%), Positives = 448/720 (62%), Gaps = 97/720 (13%)
Query: 3 PHSSLDGGIPYEVRSGEHADYGRLKVFGCTTHYHVKGNKLDNRAKKAIFLGYASGVKGYR 62
PH+ + P E+ SG+ ADY LK FGCT +YHV KL+ RAKK +F+GY GVKG+R
Sbjct: 614 PHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFR 673
Query: 63 LWCTEDKKFVISRDVVFDESSIV-AMAKATMPSCGDVGSTKAQVVEVEAEDQRVSRNHDQ 121
+W +K+ ++SR+VVFDES ++ + K T S + GS QV + +V +N
Sbjct: 674 IWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTS--ETGSLDKQV------EFQVIQNESD 725
Query: 122 VEHQDSTQYEEIDEPDHEEVQGEGTQVLQQQQQDVSVHTRPKRLYKPVQRLGSDKPLRYY 181
++ + E E D E + + Q QD RP+R+ G P RY
Sbjct: 726 LKEPEEEDQEPQTETDIPESMP--SDIHQSIAQD-----RPRRV-------GVRPPTRY- 770
Query: 182 GQANVVEYALSVEDD----EPVTFKQAITAEERESWLVAMQEEMESLHKNKTWEVVPLPE 237
G ++V YAL V ++ EP T+K+AI + + E W AM +EMESLHKN+TW++V P
Sbjct: 771 GFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPS 830
Query: 238 GKSVIGCKWMYKKKEDSSEIKGTTYKARLMAKGYAQKEGVDYNEIFSPVMKHTSIRVLLS 297
G+ +I CKW++KKKE S +G YKAR++A+G+ Q+EGVDYNEIFSPV++HTSIRVLL+
Sbjct: 831 GRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLA 890
Query: 298 IIAHSNLELEQLDVNTAFLHGDLEEEIYLAQPEGYRVEGKENQVCRLRKSLYGLKQSPRQ 357
I+AH NLELEQLDV TAFLHG+LEEEIY+ QP+G++V GKEN VC+L+KSLYGLKQSPRQ
Sbjct: 891 IVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQ 950
Query: 358 WYKRFDFFMLKHGFRRSDY-----IKKLREGDFIYLLLYVDDMLI--------------- 397
WYKRFD +M+K G+ RS Y +L + FIYL+LYVDDMLI
Sbjct: 951 WYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLL 1010
Query: 398 ----------ASRSMVEIDKLKSQLSQEFEMKDMGAAKKIL---GM-------------- 430
A+R ++ ++ ++ + ++ + +K+L GM
Sbjct: 1011 SAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANI 1070
Query: 431 ------------------EIKRERSIGSSMYAMVCTHLDISQTVSVVSWFMTNPGKTYCE 472
+ ++GS MYAMVCT D++ VSVVS FM PG+ + +
Sbjct: 1071 HLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQ 1130
Query: 473 AVKWVLRYLKGTVDTSLCFGGDT-CQVSGYVDSDYAGDLDRSRSTTGYVFRVHGAPVSWR 531
AVK + RYL+GT D L +GGDT C V+GY DSDYAGD+D RS TGYVF + G+ VSW+
Sbjct: 1131 AVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWK 1190
Query: 532 SMLQSTVALSTTESEYMAMAEGVKEALWLWSLLDDLGIKQEFVDVWCDSQSAIHLAKNQV 591
+ LQ TV LSTTE+EYMA+ E KE +WL L+ DLG+ + V+CDS SAI LAK+QV
Sbjct: 1191 ATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQV 1250
Query: 592 HHARTKHIDVRYHFVRDVIEKGDVSLMKVHTDENPADMLTKVVTCSKFQHCLELLQIGSC 651
HH RTKHIDVRYHF+R + + + KV T +NPADM TK V SKFQHCL+LL I SC
Sbjct: 1251 HHERTKHIDVRYHFLRS---EKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNIRSC 1307
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 593 bits (1528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/724 (45%), Positives = 444/724 (61%), Gaps = 97/724 (13%)
Query: 2 SPHSSLDGGIPYEVRSGEHADYGRLKVFGCTTHYHVKGNKLDNRAKKAIFLGYASGVKGY 61
SPHSSL+ IP E+ SG DY L++FGC + HV KL RA K IFLGYAS KGY
Sbjct: 326 SPHSSLNFKIPEEIWSGNPIDYSNLRIFGCPAYAHVNDGKLAPRAIKCIFLGYASESKGY 385
Query: 62 RLWCTEDK--KFVISRDVVFDESSIVAMAKATMPSCGDVGSTKAQVVEVEAEDQRVSRNH 119
RLWC+E K + ++SRDV F+E ++++ K + S + + +VE E + V+ N
Sbjct: 386 RLWCSESKSRRLILSRDVTFNEDALLSSGKQSSVSSSSTNNLQGTSEKVELELKSVAPNV 445
Query: 120 DQVEHQDSTQYEEIDEPDHEEVQGEGTQVLQQQQQDVSVHTRPKRLYKPVQRLGSDKPLR 179
D ST ID DH G+ + QQ++ +++ R +R K R
Sbjct: 446 DVP--SSSTTESSID--DH----GDDHPIQQQEEYNIA-RDRTRRQIKLPAR-------- 488
Query: 180 YYGQANVVEYALSV-----EDDEPVTFKQAITAEERESWLVAMQEEMESLHKNKTWEVVP 234
Y N+ YALS+ +D EP ++ +A++ + WLVAM EE+ESLHKN TW +
Sbjct: 489 -YTDDNLTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESLHKNNTWNLTK 547
Query: 235 LPEGKSVIGCKWMYKKKEDSSEIKGTTYKARLMAKGYAQKEGVDYNEIFSPVMKHTSIRV 294
LP+GK + CKW+YKKK+ ++ KARL+ KG+ QKEG+D+NEIFSPV++HTSIR+
Sbjct: 548 LPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRI 607
Query: 295 LLSIIAHSNLELEQLDVNTAFLHGDLEEEIYLAQPEGYRVEGKENQVCRLRKSLYGLKQS 354
LL+ +A +LELEQLDV TAFLHG+LEEEIY+ QPEG+ V KE+ VC+L+KSLYGLKQ+
Sbjct: 608 LLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQA 667
Query: 355 PRQWYKRFDFFMLKHGFRRSD-----YIKKLREGDFIYLLLYVDDMLIASRSMVEIDKLK 409
PRQWYK+FD FM+ G+ RS Y ++ +G FIYLLLYVDDMLIASR I KLK
Sbjct: 668 PRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLK 727
Query: 410 SQLSQEFEMKDMGAAKKILGMEIKRERSIGS----------------------------- 440
+QL+ EFEMK++GAAKKILGMEI R+R +G
Sbjct: 728 AQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVSTPLA 787
Query: 441 ---SMYAMVC----------THLDISQTVSVVSWFM--TNPGKTYCEAVKWVLRY----- 480
+ + +C +H+ + V + + M T P Y AV V RY
Sbjct: 788 AHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAY--AVSMVSRYMHNPG 845
Query: 481 -------------LKGTVDTSLCFG---GDTCQVSGYVDSDYAGDLDRSRSTTGYVFRVH 524
LKGT + L F T V+G+VDSDY GDLDR RS +GY+F +
Sbjct: 846 KDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSDYGGDLDRRRSLSGYIFTLC 905
Query: 525 GAPVSWRSMLQSTVALSTTESEYMAMAEGVKEALWLWSLLDDLGIKQEFVDVWCDSQSAI 584
+ +SW++ LQS ALSTTE+EY++ EGVKEALW+ L+ +LG+ Q+ + V+CDSQSAI
Sbjct: 906 NSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIRGLVKELGLTQDVLTVFCDSQSAI 965
Query: 585 HLAKNQVHHARTKHIDVRYHFVRDVIEKGDVSLMKVHTDENPADMLTKVVTCSKFQHCLE 644
HL KN +H +TKHIDV++HF+RD++ G+V L KVHT ENPADMLTK + +KFQHCL
Sbjct: 966 HLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVHTSENPADMLTKPLPNAKFQHCLG 1025
Query: 645 LLQI 648
L+ +
Sbjct: 1026 LVGL 1029