BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3080.1
(746 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010276285.1 PREDICTED: pentatricopeptide repeat-containing pr... 886 0.0
XP_010647149.1 PREDICTED: pentatricopeptide repeat-containing pr... 874 0.0
XP_006360680.1 PREDICTED: pentatricopeptide repeat-containing pr... 846 0.0
>XP_010276285.1 PREDICTED: pentatricopeptide repeat-containing protein At3g49740
[Nelumbo nucifera] XP_010276286.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g49740
[Nelumbo nucifera]
Length = 727
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/728 (57%), Positives = 556/728 (76%), Gaps = 5/728 (0%)
Query: 15 LKPTENPTQLLIKLNSSISNLSRSHHYSQALQIFNQIHSSFSLKPDHYSFTSTLTASANL 74
++P N T+ L+KLNS I+ L+RSH S+ALQ+FNQIHS+ +PD Y+ TS L+A ANL
Sbjct: 1 MRPAVNQTETLVKLNSRIAQLTRSHQNSEALQLFNQIHSASHHRPDKYTLTSALSACANL 60
Query: 75 LNLSFGNQLHSLIIHSGFKSYPHVCNSLLSLYTKSNDINSVNRVFYEIPIPDIYSWTTLL 134
++ G+QLH+ +I +GF+ Y H+ N+LLSLY K ND+NSV+RVF +I PD Y+WTTLL
Sbjct: 61 QDIVAGDQLHAYVIRAGFRDYTHIGNTLLSLYAKLNDLNSVSRVFNDITAPDAYTWTTLL 120
Query: 135 SAHVKLSKIQYALELFEKIPQT--SVAVWNAVITGSIENGYFDIAFEMFTRMHRLGLRHD 192
SA+ KL ++ +A +LF ++PQ +V+VWN++ITG +ENG+ ++AF MF +MH LG+RHD
Sbjct: 121 SAYTKLGQVNHACQLFNEMPQAQGNVSVWNSMITGCVENGHQEVAFVMFRQMHFLGIRHD 180
Query: 193 HYSFASVLSLCSSSPLLDFGRHVHSLVLKTGYFVRVSVMNSLISMYFNCGTVSDAFEVFE 252
+Y+FAS+LS C SS LLDFGR VHSLV++TG+ +R+SV+N+ ++MYFNCG V DA +FE
Sbjct: 181 NYTFASILSACDSSELLDFGRQVHSLVIRTGFLLRLSVLNAQLTMYFNCGMVEDAIMLFE 240
Query: 253 EAKSNEVNQISFNAMIAGLVGREREVEALLMFMDMKEACFKPTELTFVSILSSCSSKEML 312
E +S + NQI+ NAMIAGL R R+VEAL++F +M+E P E TF S++SSCSS M+
Sbjct: 241 ETESTKRNQITCNAMIAGLASRGRDVEALMIFKEMQENHLVPNERTFTSVISSCSSTGMV 300
Query: 313 GIGEQIYAEIIKMGFEGITSVSNAAITMYSNCADLAASSVVFERLRNKDLVSWNSMTACY 372
+G Q++A IKMGF+ T V+NA ITMYS C DL A+S+VFE L KD +SWNSM Y
Sbjct: 301 KLGHQLHALAIKMGFQTCTYVNNAMITMYSICGDLGAASIVFETLECKDPISWNSMITGY 360
Query: 373 VRGGDYESAVTVFRQMQTQGIKPDDYTVGSILGCSE-LGFTKMIQALVTKNGLLINTQVC 431
+G SA+ V+ QMQ GI+PD++TVGS++ S+ L F +M+QA + KN L+ N QVC
Sbjct: 361 AQGNLQTSAIMVYMQMQRAGIQPDEFTVGSLVANSDCLEFIEMMQATMVKNRLIQNNQVC 420
Query: 432 NAMISAYSKHGQIESANYIFVEMPYRNLISWNSIISACLFNRLPLLGLEIFCKLQ-SKMK 490
NA+IS YSKH Q++ A IF M RNLISWN+++ CL+N LP LGL++F KLQ S++K
Sbjct: 421 NALISVYSKHAQMKQAFRIFDAMLSRNLISWNTVMCGCLYNGLPNLGLDLFHKLQISELK 480
Query: 491 PCLYTLSIILNICSSISALRYGNQVHGYIIRSEFHSEISLGNALITMYAKCGVLAWASRV 550
P LY+LSI+L+IC++ S LR+G QVH YIIR+ F E LGN LI+ YA+CG L W+++V
Sbjct: 481 PDLYSLSIVLSICANRSILRHGKQVHAYIIRAGFGLETPLGNTLISFYAECGDLDWSAKV 540
Query: 551 FHLMPEKDVVSWNSMTSAYGQHGEGEEAVFCYNRMKELGSIKPDEATFTAVLSACSHAGL 610
F M E+D+VSWN+M SAY HGEG++A+ C+ +M E G K D+ TFTAVLSACSHAGL
Sbjct: 541 FSGMMERDIVSWNAMISAYAHHGEGKKAIACFKKMWESGE-KLDQTTFTAVLSACSHAGL 599
Query: 611 VDEGRRIFFSMVEEYRIEPGIDHYSCIIDLLARAGHLDEAEKLINDMPFEADSSIWWPLL 670
VD+GR IF SM++ + I PG+DHYSCIIDLL RAGHLDEAE+LIN MPF+AD IWW +L
Sbjct: 600 VDDGRLIFASMMDHHGISPGVDHYSCIIDLLGRAGHLDEAERLINTMPFQADPKIWWAIL 659
Query: 671 SACAAHGNVRLGKIAAEFIREREPDNSAVYVLLSNVYAAAGKWEEAANVREVMEKNRVIK 730
S+C HGN RLG+IAA F+ E E +N AVYVLLSN+ AA G WEEAAN+RE+M KNR+IK
Sbjct: 660 SSCQIHGNARLGRIAAGFLLEIETENPAVYVLLSNIIAATGHWEEAANIRELMRKNRMIK 719
Query: 731 QPGYSWIE 738
QPG SW+E
Sbjct: 720 QPGCSWVE 727
>XP_010647149.1 PREDICTED: pentatricopeptide repeat-containing protein At3g49740
[Vitis vinifera] XP_002263704.2 PREDICTED:
pentatricopeptide repeat-containing protein At3g49740
[Vitis vinifera] XP_010647150.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g49740
[Vitis vinifera] XP_010647151.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g49740
[Vitis vinifera] XP_010647153.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g49740
[Vitis vinifera]
Length = 735
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/727 (59%), Positives = 543/727 (74%), Gaps = 6/727 (0%)
Query: 15 LKPTENPTQLLIKLNSSISNLSRSHHYSQALQIFNQIHSSFSLKPDHYSFTSTLTASANL 74
+K T+N + LIK+N ++ L+RSHH S ++Q+F QIHSS LKPDH++ +STLTA ANL
Sbjct: 13 VKTTKNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANL 72
Query: 75 LNLSFGNQLHSLIIHSGFKSYPHVCNSLLSLYTKSNDINSVNRVFYEIPIPDIYSWTTLL 134
+ GNQLH+ I +G K+Y HV N+LLS Y KS D+ SV RVF EI PD+YSWTTLL
Sbjct: 73 RYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLL 132
Query: 135 SAHVKLSKIQYALELFEKIPQTSVAVWNAVITGSIENGYFDIAFEMFTRMHRLGLRHDHY 194
SA KL +I YA LF + P+ VWNA+ITG EN + +IA +F MH+LG+RHD Y
Sbjct: 133 SACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKY 192
Query: 195 SFASVLSLCSSSPLLDFGRHVHSLVLKTGYFVRVSVMNSLISMYFNCGTVSDAFEVFEEA 254
+FASVLSLCS LLDFGR VH+LV+KTG+ VR SV+N+L++MYFN G V+DA+EVFEEA
Sbjct: 193 TFASVLSLCSL-ELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEA 251
Query: 255 KSNEVNQISFNAMIAGLVGREREVEALLMFMDMKEACFKPTELTFVSILSSCSSKEMLGI 314
+S + I+FN MI GL R+ EAL+MF +M+EAC +PTELTFVS++SSCSS +
Sbjct: 252 ESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSAR---V 308
Query: 315 GEQIYAEIIKMGFEGITSVSNAAITMYSNCADLAASSVVFERLRNKDLVSWNSMTACYVR 374
Q++A+ IKMGFE T VSNAA+TMYS+C +L A +VF+RL KDL+SWN + Y +
Sbjct: 309 SHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQ 368
Query: 375 GGDYESAVTVFRQMQTQGIKPDDYTVGSILGCSE-LGFTKMIQALVTKNGLLINTQVCNA 433
G Y A+ F QMQ GI+PD++T+GS+L SE L KM QALV+KNGL +V NA
Sbjct: 369 GNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNA 428
Query: 434 MISAYSKHGQIESANYIFVEMPYRNLISWNSIISACLFNRLPLLGLEIFCKL-QSKMKPC 492
++SA+SKHGQIE A +F M NLISWN+IIS LFN L GLE F +L S +KP
Sbjct: 429 LVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPN 488
Query: 493 LYTLSIILNICSSISALRYGNQVHGYIIRSEFHSEISLGNALITMYAKCGVLAWASRVFH 552
YTLSI+L+IC+SISALR+G Q+HGYI+RS S SLGNALITMYAKCG L W+ R+F+
Sbjct: 489 AYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFN 548
Query: 553 LMPEKDVVSWNSMTSAYGQHGEGEEAVFCYNRMKELGSIKPDEATFTAVLSACSHAGLVD 612
+M +D+VSWN+M SAY QHG+G+EAV + M++ G +KPD+ATFTAVLSACSHAGLVD
Sbjct: 549 VMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVD 608
Query: 613 EGRRIFFSMVEEYRIEPGIDHYSCIIDLLARAGHLDEAEKLINDMPFEADSSIWWPLLSA 672
+G RIF SMV +Y EPG DH SCI+DLL RAG+L+EAE+LIN + SSIWW L SA
Sbjct: 609 DGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSA 668
Query: 673 CAAHGNVRLGKIAAEFIREREPDNSAVYVLLSNVYAAAGKWEEAANVREVMEKNRVIKQP 732
CAAHGN+RLG+I A F+ E E ++ AVYVLLSN+YAAAG+WEEAAN R++M+K RV KQP
Sbjct: 669 CAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQP 728
Query: 733 GYSWIES 739
G SWI S
Sbjct: 729 GCSWIGS 735
>XP_006360680.1 PREDICTED: pentatricopeptide repeat-containing protein At3g49740
[Solanum tuberosum]
Length = 723
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/727 (55%), Positives = 547/727 (75%), Gaps = 6/727 (0%)
Query: 15 LKPTENPTQLLIKLNSSISNLSRSHHYSQALQIFNQIHSSFSLKPDHYSFTSTLTASANL 74
+K TE+ ++ LIKLN +SN + SH +S AL +FNQIHSS L+PDHY+ ++TLTA AN+
Sbjct: 1 MKLTESSSKQLIKLNCLLSNFTHSHQFSDALSLFNQIHSSLHLRPDHYTLSTTLTACANI 60
Query: 75 LNLSFGNQLHSLIIHSGFKSYPHVCNSLLSLYTKSNDINSVNRVFYEIPIPDIYSWTTLL 134
+N SFGNQLH I + K +PHV NSLLS Y KS D+ SV RVF EI PD+YSWTTLL
Sbjct: 61 VNTSFGNQLHGFAIKTDLKQFPHVSNSLLSFYAKSKDLGSVKRVFKEIETPDVYSWTTLL 120
Query: 135 SAHVKLSKIQYALELFEKIPQTSVAVWNAVITGSIENGYFDIAFEMFTRMHRLGLRHDHY 194
SA KL ++ YA ++F+++PQ ++AVWNA+ITG E+GY IA +F RMH LG+R+D+Y
Sbjct: 121 SACTKLGEVGYACKVFDEMPQRNLAVWNAMITGCAESGYHGIALNLFQRMHFLGVRYDNY 180
Query: 195 SFASVLSLCSSSPLLDFGRHVHSLVLKTGYFVRVSVMNSLISMYFNCGTVSDAFEVFEEA 254
+FASVLSLC LLDFGR VHS+V+KTG+ VR SV+N+L++MYFNC DAF VFEEA
Sbjct: 181 AFASVLSLCDME-LLDFGRQVHSMVIKTGFLVRASVINALVTMYFNCNNDFDAFGVFEEA 239
Query: 255 KSNEVNQISFNAMIAGLVGREREVEALLMFMDMKEACFKPTELTFVSILSSCSSKEMLGI 314
+ ++ +++NAMIAGLV ER EAL+MF DM++ +PTE TFVSI+SSCS + I
Sbjct: 240 EDEVLDPVTYNAMIAGLVSMERAEEALVMFKDMRKFSLRPTEFTFVSIMSSCSC---IRI 296
Query: 315 GEQIYAEIIKMGFEGITSVSNAAITMYSNCADLAASSVVFERLRNKDLVSWNSMTACYVR 374
Q++A++ ++G E TS++NA ITMY++C +L A+ +VFERL+ KD VSWN+M Y +
Sbjct: 297 ASQLHAQVARIGLENYTSIANATITMYASCGNLNAAFLVFERLKVKDSVSWNAMITSYAQ 356
Query: 375 GGDYESAVTVFRQMQTQGIKPDDYTVGSILGCSE-LGFTKMIQALVTKNGLLINTQVCNA 433
+A++ + QMQ +G++PD++T+GSIL SE L ++I +V K L++ T+V NA
Sbjct: 357 NCLDSAAISAYIQMQKEGLEPDEFTIGSILASSESLVIVEIILGVVLKKALILKTEVSNA 416
Query: 434 MISAYSKHGQIESANYIFVEMPYRNLISWNSIISACLFNRLPLLGLEIFCKLQS-KMKPC 492
++SA+ KHG+++ A +F +M RN+ISWN++IS C N LP+ L +F ++ S ++ P
Sbjct: 417 LLSAFCKHGEMKQAYQVFHDMFPRNMISWNTLISGCHLNGLPMGCLHLFSEVVSERLMPN 476
Query: 493 LYTLSIILNICSSISALRYGNQVHGYIIRSEFHSEISLGNALITMYAKCGVLAWASRVFH 552
+TLSIIL++C+SISAL+ G ++H YI++S F SEISLGNALIT+YAKCG+L W+ +VF
Sbjct: 477 PFTLSIILSVCASISALQQGKEIHTYILKSGFISEISLGNALITLYAKCGLLHWSLKVFQ 536
Query: 553 LMPEKDVVSWNSMTSAYGQHGEGEEAVFCYNRMKELGSIKPDEATFTAVLSACSHAGLVD 612
+M +KD VSWNS+ +AY QHG+G+EAV C+ M+ELG +KPD TF AVLSACSH+GL+D
Sbjct: 537 IMTQKDTVSWNSIITAYAQHGKGKEAVHCFEMMQELGGVKPDNTTFNAVLSACSHSGLID 596
Query: 613 EGRRIFFSMVEEYRIEPGIDHYSCIIDLLARAGHLDEAEKLINDMPFEADSSIWWPLLSA 672
+G +F SMV Y IEP DH+SCI+DLL RAG+LDEAEKL+ D + DS++WW L S+
Sbjct: 597 KGIEVFTSMVHTYGIEPTADHFSCIVDLLGRAGYLDEAEKLVKDRHVDVDSTVWWTLFSS 656
Query: 673 CAAHGNVRLGKIAAEFIREREPDNSAVYVLLSNVYAAAGKWEEAANVREVMEKNRVIKQP 732
CAA+GNVRLG+IAA F+ E E +N VYVLLSN+YA+A WE++ANVR++M K V+KQP
Sbjct: 657 CAAYGNVRLGRIAAGFLLETEKNNPTVYVLLSNIYASAENWEDSANVRKLMNKCGVLKQP 716
Query: 733 GYSWIES 739
G SWI S
Sbjct: 717 GSSWIGS 723