BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3340.1
(518 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDP16120.1 unnamed protein product [Coffea canephora] 84 1e-13
CDY09167.1 BnaA02g05930D [Brassica napus] 82 4e-13
XP_006304818.1 hypothetical protein CARUB_v10012444mg, partial [... 80 1e-12
>CDP16120.1 unnamed protein product [Coffea canephora]
Length = 430
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 57/298 (19%)
Query: 32 GHPNKKKNNNKKKEKVSCNVTSSANPISSISSRSSNEDWLIFEILTRLPVKTLIRFKSVC 91
G P +K+++ K K++ + S +S+ + + LI +IL+RLP KT+I+ KSVC
Sbjct: 2 GRPEEKESS-AKSYKITQKLNQSQRKMSNQAHFLNLPSHLINDILSRLPTKTIIQCKSVC 60
Query: 92 KHWCSLIQKDQNFIDLHLTRSRKRPPRIFIVVPLPRTKAQVKLLNRLQGASYYDYWPYKE 151
K W SL+ + + F LHL RS PP + I + +
Sbjct: 61 KSWLSLLSESE-FTKLHLQRS---PPCLII-----------------------NKFGCHP 93
Query: 152 FHITADLLVKEEEEPVDNNGVRTSRGTKLKLVVDTVRKINSSSYHEMLKPINGLICLIDN 211
+T LV+ E+EP D++G R GT +K + S + M+ INGLICL ++
Sbjct: 94 SELTCFGLVEFEDEP-DHHGFRYVAGTTIKPPEGCIENGLSVT---MVGSINGLICLTES 149
Query: 212 YIKHGVR------IRNICTGQVSPWFHSSLGEGEKYPHGFPYYGFGFDPATNEHKLVCVW 265
Y KH +R V W G Y YGFG + ++K+V ++
Sbjct: 150 YHKHDAVNLWNPIMRESIALPVPEW-------GRSYTSTVS-YGFGLSSESRKYKVVRIF 201
Query: 266 -DMQSGINHYI---CEVLTIGHQGNSINNNNRWRRIEDVPPDGPWGD-SVYVNGVIYW 318
+++ H + C V T+G + WRRIE P +G V++NG ++W
Sbjct: 202 VELEKNTRHILKSNCYVYTLGEE------TELWRRIEQAPFLYNYGTYGVFLNGNLHW 253
>CDY09167.1 BnaA02g05930D [Brassica napus]
Length = 407
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 73/297 (24%)
Query: 71 LIFEILTRLPVKTLIRFKSVCKHWCSLIQKDQNFIDLHLTRSRKRPPRIFIVVPLPRTKA 130
LI EIL+RLPVK L+RF+SV K W S I + +NF+D LTRS+ +P + + L TK
Sbjct: 30 LIVEILSRLPVKPLLRFQSVSKLWFSAI-RTKNFVDSFLTRSKTKPRLLLPFMHLDPTKL 88
Query: 131 QVKLLNRLQGASYYDYWPYKEFHITADLLVKEEEEPVDNNGVRTSRGTKLKLVVDTVRKI 190
+ L P DN+ + + + + I
Sbjct: 89 RPPL-----------------------------SAPEDNSKEDVDKSSS-TVTLRHYMTI 118
Query: 191 NSSSYHEMLKPINGLICLIDNYIKHGVRIRNICTGQVSPWFHSSLGEGEKYPHGFPYYGF 250
+ Y+ M +P+NGLIC + + + + N T Q+ + +Y H F
Sbjct: 119 SDLVYYTMSRPVNGLICCMRD---SSIAVCNPATRQIVKL--PDVTRNRRYIHAF----L 169
Query: 251 GFDPATNEHKLVCVWDMQ-----------SGINHYICEVLTIGHQGNSINNNNRWRRIED 299
G+DP +++K++CV + SG H +C V + + WR+IE+
Sbjct: 170 GYDPVEDQYKVLCVMMTKFDWSRPHDRPGSGPEHLVCTVTS--------SEKQEWRKIEN 221
Query: 300 VPPD---GPWGDSVYVNGVIYWTNFSLFRWPKCKYSPVCLVAFDVGSEKFRTITVPD 353
D G + + G IY+ R + +V FDV +E + I P+
Sbjct: 222 TTIDIYRTVIGGGMCIAGAIYYE----VRQSR-------IVRFDVRTETIKLIKAPE 267
>XP_006304818.1 hypothetical protein CARUB_v10012444mg, partial [Capsella rubella]
EOA37716.1 hypothetical protein CARUB_v10012444mg,
partial [Capsella rubella]
Length = 385
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 62/284 (21%)
Query: 71 LIFEILTRLPVKTLIRFKSVCKHWCSLIQKDQNFIDLHLTRSRKRPPRIFIVVPLPRTKA 130
LI EIL+RLPV ++ R++ V K W SL+Q+ Q+F +L LTR+ P+PR +
Sbjct: 27 LIIEILSRLPVNSIARYRFVSKQWASLLQR-QDFTELFLTRT-----------PMPRRQ- 73
Query: 131 QVKLLNRLQGASYYDYWPYKEFHITADLLVKEEEEPVDNNGVRTSRGTKLKLVVDTVRKI 190
+LL + S + Y+ + ++ DN V + + +
Sbjct: 74 --RLLFTFRFGSKWHYFS-----------SPQPQDFGDNVSV---------VATEYIMGY 111
Query: 191 NSSSYHEMLKPINGLICLIDNYIKHGVRIRNI------CTGQVSPWFHSSLGEGEKYPHG 244
+ + Y E+ + +NG I L D + ++N+ CTGQ H +L + E
Sbjct: 112 SGTRYKEICQSVNGFIYLNDKRFLSYIDVKNVPVICNPCTGQ-----HITLPKVETGNAD 166
Query: 245 FPYYGFGFDPATNEHKLVCVWDMQSGINHYICEVLTIGHQGNSINNNNRWRRIEDVPPDG 304
Y FG+DP + K++C + ++ +VLT+G WR+IE
Sbjct: 167 LKCY-FGYDPIRKQFKVLCWTMFRQTTSNVKYQVLTLG------TGELLWRKIECPIRHT 219
Query: 305 P--WGDSVYVNGVIYWTNFSLFRWPKCKYSPVCLVAFDVGSEKF 346
P + + +NGV+Y+T++ + + +V FDV SEKF
Sbjct: 220 PEIERNGICINGVLYYTSYR-------HGTSIRIVCFDVRSEKF 256