BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3470.1
(834 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI22284.3 unnamed protein product, partial [Vitis vinifera] 195 2e-48
CDP02303.1 unnamed protein product [Coffea canephora] 195 3e-48
XP_008353497.1 PREDICTED: chaperone protein ClpB3, chloroplastic... 182 4e-48
>CBI22284.3 unnamed protein product, partial [Vitis vinifera]
Length = 875
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 126/180 (70%), Gaps = 8/180 (4%)
Query: 356 LTYNKSYHRTTLKPLLNCSHALKSSTNDSEIWRIEETPASSSRGSSFVVRCEA--GRITQ 413
L+ N S R +LK L ++L+ ND ++ + S SFVVRC+A GRITQ
Sbjct: 30 LSLNLSARRRSLKAL----NSLRLKQND--VFLSKRFAGSGKCPRSFVVRCDASGGRITQ 83
Query: 414 QEFMEMAWQTIVSSPEAAKEKKQQIVESEHLMKAILEQKYGLARLKFATTGIDNTRLLEA 473
Q+F EMAWQ IVSSPE AKE K QIVE+EHLMKA+LEQK GLAR F+ G+DNTRLL+A
Sbjct: 84 QDFTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLEQKNGLARRIFSKAGVDNTRLLDA 143
Query: 474 AEKLIPWHRKALGESTGSMLGTDLEDLIQRARDYKKKFNDSFVLIGHSVLDFVQDQRSGE 533
+K I K +GES GSMLG DLE LIQRAR+YKK++ DSFV + H VL FVQDQR G+
Sbjct: 144 TDKFIQRQPKVIGESAGSMLGRDLESLIQRAREYKKEYGDSFVSVEHLVLAFVQDQRFGK 203
>CDP02303.1 unnamed protein product [Coffea canephora]
Length = 977
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 120/165 (72%), Gaps = 4/165 (2%)
Query: 371 LNCSHALKSSTNDSEIWRIEETPASSSRGSSFVVRCE--AGRITQQEFMEMAWQTIVSSP 428
L ++LK D+ + R E SSR SFVVRCE +GRITQQEF +MAWQ IVSSP
Sbjct: 43 LKSLNSLKLKRKDAFLTRRSEKLGRSSR--SFVVRCETSSGRITQQEFTDMAWQAIVSSP 100
Query: 429 EAAKEKKQQIVESEHLMKAILEQKYGLARLKFATTGIDNTRLLEAAEKLIPWHRKALGES 488
E AKE K QIVE+EHLMKA+LEQK GLAR F+ G+DNTRLL+A +K I K LGES
Sbjct: 101 EVAKENKHQIVETEHLMKALLEQKNGLARRIFSKVGVDNTRLLDATDKFIQRQPKVLGES 160
Query: 489 TGSMLGTDLEDLIQRARDYKKKFNDSFVLIGHSVLDFVQDQRSGE 533
+GSMLG DLE LIQRARDYKK++ DSF+ + H VL FVQD R G+
Sbjct: 161 SGSMLGRDLEALIQRARDYKKEYGDSFMSVEHLVLGFVQDNRFGK 205
>XP_008353497.1 PREDICTED: chaperone protein ClpB3, chloroplastic-like [Malus
domestica]
Length = 302
Score = 182 bits (462), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 135/233 (57%), Gaps = 49/233 (21%)
Query: 323 TELMAGVNFSH------------ADLFA----SVPLNDNGDNINHFLN-PLTYNKSYHRT 365
T L +GV H A +FA S+ N D+ F++ LT N S+ RT
Sbjct: 5 TSLSSGVALVHLPQSGFPKCCDKASVFARPHHSLSFNSRADSFQAFISRQLTPNGSF-RT 63
Query: 366 TLKPLLNCSHALKSSTNDSEIWRIEETPASSSRGSS-FVVRCEA----GRITQQEFMEMA 420
L WR ++R S FVVRCEA GRITQQ+F EMA
Sbjct: 64 GL-------------------WR-------TNRNSRPFVVRCEASTGRGRITQQDFTEMA 97
Query: 421 WQTIVSSPEAAKEKKQQIVESEHLMKAILEQKYGLARLKFATTGIDNTRLLEAAEKLIPW 480
WQ IVSSPE AKE K QIVE+EHL+KA+LEQK GLAR F+ G+DN RLLEA +K I
Sbjct: 98 WQAIVSSPEVAKENKHQIVETEHLLKALLEQKNGLARRIFSKVGVDNARLLEATDKYIQR 157
Query: 481 HRKALGESTGSMLGTDLEDLIQRARDYKKKFNDSFVLIGHSVLDFVQDQRSGE 533
K GES GSMLG DLE LIQRARDYKK++ DSFV + H VL F QDQR G+
Sbjct: 158 QPKVFGESAGSMLGRDLEALIQRARDYKKEYGDSFVSVEHLVLGFSQDQRFGK 210