BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000109.1_g0030.1
(182 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADP20178.1 gag-pol polyprotein [Silene latifolia] 161 1e-42
ADP20179.1 gag-pol polyprotein [Silene latifolia] 156 5e-41
KZV48196.1 hypothetical protein F511_10782, partial [Dorcoceras ... 144 6e-40
>ADP20178.1 gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 161 bits (407), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 110/160 (68%), Gaps = 11/160 (6%)
Query: 1 MKKLRENVWAEIERANKKYRKKANKNRRAKSFEPGNLVWLHLRKERFPNKRKSKLMPRLE 60
+ KL E V +IER N++Y+K + K FEPG+LVW+HLRKERFP KRK+KLMPR +
Sbjct: 1343 LLKLHETVKRQIERTNEQYQKHLKVPKGKKEFEPGDLVWIHLRKERFPAKRKNKLMPRSD 1402
Query: 61 GPFKILEKIGDNAYKLELPGDYGVSATFNVGDLSPYFE---DDELSDLRKNPFQPGESDA 117
GPF+++EKIG +AYK++LPGDYGV TFNVGDLSPY+E D+E++ LR +P QPG DA
Sbjct: 1403 GPFEVVEKIGPSAYKIDLPGDYGVHGTFNVGDLSPYYEDSGDEEVTGLRTSPVQPGGVDA 1462
Query: 118 GASE--------LATRADPNNSGSRNRSGTSSAGIRRYSY 149
GAS AT+A +++ S + S+ +Y Y
Sbjct: 1463 GASNQGNQIFQGQATQATTSHNHSYLATDQSTLQGHKYQY 1502
>ADP20179.1 gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 156 bits (395), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 101/145 (69%), Gaps = 3/145 (2%)
Query: 1 MKKLRENVWAEIERANKKYRKKANKNRRAKSFEPGNLVWLHLRKERFPNKRKSKLMPRLE 60
M + E V +IE+AN+ ++ K+ + KSFEPG+LVW+HLRKERFP KRK+KLMPR +
Sbjct: 1331 MLHIHEQVKKQIEKANEAHKGKSKGVKGTKSFEPGDLVWIHLRKERFPEKRKNKLMPRAD 1390
Query: 61 GPFKILEKIGDNAYKLELPGDYGVSATFNVGDLSPYF---EDDELSDLRKNPFQPGESDA 117
GPF++LEK G NAYK+ LPG+YGV TFNVGDLSPY+ E+D+L DLR NPFQ GE +
Sbjct: 1391 GPFEVLEKFGSNAYKINLPGEYGVHGTFNVGDLSPYYEEIEEDKLEDLRANPFQEGEIET 1450
Query: 118 GASELATRADPNNSGSRNRSGTSSA 142
+E + +R RS +S
Sbjct: 1451 NQTEKGHISPGFGPCTRLRSNMNSV 1475
>KZV48196.1 hypothetical protein F511_10782, partial [Dorcoceras hygrometricum]
Length = 246
Score = 144 bits (363), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 93/128 (72%), Gaps = 4/128 (3%)
Query: 1 MKKLRENVWAEIERANKKYRKKANKNRRAKSFEPGNLVWLHLRKERFPNKRKSKLMPRLE 60
++ L E V A IE+ ++Y ++ANK ++ +FEPG+ VWLHLRKERFP KR+SKL+PR +
Sbjct: 86 VRTLHEKVGANIEKKIQQYTRQANKGKKKVTFEPGDWVWLHLRKERFPEKRRSKLLPRGD 145
Query: 61 GPFKILEKIGDNAYKLELPGDYGVSATFNVGDLSPYFEDDELSDLRKNPFQPGESDAGAS 120
GPF++LE+I DNAYKL+LPG+Y VSATFNV DLS F+ DLR NP Q GE DA
Sbjct: 146 GPFQVLERINDNAYKLDLPGEYNVSATFNVSDLS-LFDVGHDQDLRTNPSQDGEDDAIT- 203
Query: 121 ELATRADP 128
A R DP
Sbjct: 204 --AIRRDP 209