BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0110.1
(122 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CCA65974.1 hypothetical protein [Beta vulgaris subsp. vulgaris] 68 7e-11
XP_010677643.1 PREDICTED: uncharacterized protein LOC104893237 [... 67 1e-10
CCA66153.1 hypothetical protein [Beta vulgaris subsp. vulgaris] 67 1e-10
>CCA65974.1 hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1379
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 2 DFPSTLVSHLLGVGSDHIPIILTTATTSNLGKRPFKFIRTWMSHLDCGNFIRDHW-PSNS 60
+FPS +S L SDH P+ LT T N G +PF+F W++ C + W S +
Sbjct: 206 EFPSMRLSLLQRGLSDHCPL-LTNIHTQNWGPKPFRFQNCWLTDPHCLEIVNKTWLESTN 264
Query: 61 IPIQPKLNQLAVNLARWNKTVFGHLDHRIRVLTEALQNTDNSDCYHDINNQLDEAYNQQE 120
+P+ KL ++ + L WN+ FGH+D I+++ + +Q D +++ Q E + +
Sbjct: 265 MPMIDKLRRVKIRLKAWNRDEFGHIDTNIKIMEDEIQKFDTISNERELDEQEIERRKEAQ 324
Query: 121 S 121
S
Sbjct: 325 S 325
>XP_010677643.1 PREDICTED: uncharacterized protein LOC104893237 [Beta vulgaris
subsp. vulgaris]
Length = 347
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 1 MDFPSTLVSHLLGVGSDHIPIILTTATTSNLG--KRPFKFIRTWMSHLDCGNFIRDHWPS 58
M F + H L V DH PI+++ + L RPFKF TW++H F++D W
Sbjct: 136 MQFDRARMRHFLAVQPDHNPILISPNEFAPLHDLNRPFKFQATWLTHEHFQEFLKDKWNP 195
Query: 59 NSIPIQPKLNQLAVNLARWNKTVFGHLDHRIRVLTEALQNTDNSDCYHD----------I 108
NS P+ P L LA L WNK VFG++ H+ + L + + H +
Sbjct: 196 NS-PLVPALANLAHELKNWNKEVFGNIFHQKKRLLARIVGVQTALYCHKERRLLKLEARL 254
Query: 109 NNQLDEAYNQQE 120
+LDE ++E
Sbjct: 255 RRELDETLEREE 266
>CCA66153.1 hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 3 FPSTLVSHLLGVGSDHIPIILTTATTSNLGKRPFKFIRTWMSHLDCGNFIRDHW-PSNSI 61
FP+ +S L SDH PI++ T N G RPF+FI W+SH C I W ++
Sbjct: 207 FPTLQISLLKRTLSDHCPILVQT-KLKNWGPRPFRFIDAWLSHPGCLKLISKTWLEAHDC 265
Query: 62 PIQPKLNQLAVNLARWNKTVFGHLDHRIRVLTEALQNTDN-SDCYHDINNQLDEAYNQQ 119
KL ++ +L +WN FG +D +I+ L +Q D +D + N+L+E Q
Sbjct: 266 SFSEKLKKVKSSLLKWNAEEFGCIDEKIQSLENKIQEMDRIADDRNLEANELEERRKSQ 324