BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000112.1_g0230.1
(246 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009380029.1 PREDICTED: proteasome subunit alpha type-6 [Musa ... 486 e-174
OAY76433.1 Proteasome subunit alpha type-6 [Ananas comosus] 484 e-173
XP_006842706.1 PREDICTED: proteasome subunit alpha type-6 [Ambor... 483 e-172
>XP_009380029.1 PREDICTED: proteasome subunit alpha type-6 [Musa acuminata subsp.
malaccensis]
Length = 246
Score = 486 bits (1251), Expect = e-174, Method: Compositional matrix adjust.
Identities = 231/246 (93%), Positives = 237/246 (96%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVK SGITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD TSVTHLFPITK+LGLLATGMTADARSLVQQARN+AAEFRFKWGYEMPVDVLAKW+AD
Sbjct: 61 LDQTSVTHLFPITKYLGLLATGMTADARSLVQQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQ+YTQHAYMRPLGV AMVLGIDEE GPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE
Sbjct: 121 KSQIYTQHAYMRPLGVVAMVLGIDEEKGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 181 KKMKNDPQFSYAETVQTAISALQSVLQEDFKATEIEVGVVRKESPEFRVLTTEEIDEHLT 240
KKMKNDP FSY ETVQTAISALQSVLQEDFKATEIEVGVVR + P FRVL+TEEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKATEIEVGVVRNDDPAFRVLSTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>OAY76433.1 Proteasome subunit alpha type-6 [Ananas comosus]
Length = 246
Score = 484 bits (1247), Expect = e-173, Method: Compositional matrix adjust.
Identities = 231/246 (93%), Positives = 236/246 (95%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVK SGITSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKASGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD TSVTHLFPITK+LGLLATGMTADARSLV QARN+AAEFRFKWGYEMPVDVLAKW+AD
Sbjct: 61 LDQTSVTHLFPITKYLGLLATGMTADARSLVHQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQ+YTQHAYMRPLGVAAMVLGIDEE GPQLFKCDPAGHFFGHKATS GLKEQEAINFLE
Sbjct: 121 KSQIYTQHAYMRPLGVAAMVLGIDEEKGPQLFKCDPAGHFFGHKATSTGLKEQEAINFLE 180
Query: 181 KKMKNDPQFSYAETVQTAISALQSVLQEDFKATEIEVGVVRKESPEFRVLTTEEIDEHLT 240
KKMKNDP FSY ETVQT ISALQSVLQEDFKATEIEVGVVRKE P FRVL+TEEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTTISALQSVLQEDFKATEIEVGVVRKEDPVFRVLSTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246
>XP_006842706.1 PREDICTED: proteasome subunit alpha type-6 [Amborella trichopoda]
ERN04381.1 hypothetical protein AMTR_s00147p00090390
[Amborella trichopoda]
Length = 246
Score = 483 bits (1243), Expect = e-172, Method: Compositional matrix adjust.
Identities = 228/246 (92%), Positives = 239/246 (97%)
Query: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKGSGITSIGVRGKDSVCVVTQKKVPDKL 60
MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVK +GITSIGVRGKDS+CVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKL 60
Query: 61 LDHTSVTHLFPITKFLGLLATGMTADARSLVQQARNQAAEFRFKWGYEMPVDVLAKWLAD 120
LD TSVTHLFPITK+LGLLATGMTADARSLVQQAR++AAEFRFKWGYEMPVDVLAKW+AD
Sbjct: 61 LDQTSVTHLFPITKYLGLLATGMTADARSLVQQARHEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 121 KSQVYTQHAYMRPLGVAAMVLGIDEENGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
KSQ+YTQHAYMRPLG+AAMVLGIDEE GPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE
Sbjct: 121 KSQIYTQHAYMRPLGIAAMVLGIDEEKGPQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 181 KKMKNDPQFSYAETVQTAISALQSVLQEDFKATEIEVGVVRKESPEFRVLTTEEIDEHLT 240
KKMKNDP FSY ETVQT ISALQSVLQEDFKATEIEVGVVR+E+P FRVL+TEEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTTISALQSVLQEDFKATEIEVGVVRRENPVFRVLSTEEIDEHLT 240
Query: 241 AISERD 246
AISERD
Sbjct: 241 AISERD 246