BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000113.1_g0130.1
         (104 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU32278.1 hypothetical protein TSUD_62940 [Trifolium subterraneum]    67   7e-11
CAN64002.1 hypothetical protein VITISV_023116 [Vitis vinifera]         65   3e-10
CAN68623.1 hypothetical protein VITISV_010681 [Vitis vinifera]         65   4e-10

>GAU32278.1 hypothetical protein TSUD_62940 [Trifolium subterraneum]
          Length = 1409

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 15/104 (14%)

Query: 12  ILGYAFDHKGYKCLDISIGRVYISRDVMFNESHFPHSAISPA-----SLPCPSL------ 60
            LGY+  HKGYKCL  + GR+Y+S+DVMFNES FP+ ++ P      S P P +      
Sbjct: 769 FLGYSTTHKGYKCLSPT-GRIYVSKDVMFNESRFPYESLFPTPNSALSNPTPDIPLTTLP 827

Query: 61  ---HSPPILHSLPTQTQPSSSPIQPSPIPTHLPSPIQPSSTLPH 101
               +  IL ++   T  SS+  QPS  P     P QP + LPH
Sbjct: 828 IGTQNENILTNIQNPTDQSSNTNQPSTSPPTTLQPTQPDTELPH 871


>CAN64002.1 hypothetical protein VITISV_023116 [Vitis vinifera]
          Length = 1211

 Score = 65.5 bits (158), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 8/88 (9%)

Query: 11  AILGYAFDHKGYKCLDISIGRVYISRDVMFNESHFPHSAISPASLPCPSLHSPPILHSLP 70
             LGY+  HKGY C+  S GRVYISRDV+FNE+ FP+S    AS   PS  SP   H   
Sbjct: 593 TFLGYSLKHKGYXCMS-SNGRVYISRDVIFNETSFPYSKTIQASSCLPSTVSPFTSH--- 648

Query: 71  TQTQPSSSPIQPSPIPTHLPSPIQPSST 98
               PS+SP  P   PT LP+P  P S+
Sbjct: 649 --LSPSASP--PILSPTMLPTPTSPISS 672


>CAN68623.1 hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score = 64.7 bits (156), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 50/89 (56%), Gaps = 12/89 (13%)

Query: 12  ILGYAFDHKGYKCLDISIGRVYISRDVMFNESHFPHSAISPASLPCPSLHSPPILHSLPT 71
            LGY+  HKGYKC+  S GRVYISRDV+FNE+ F +S    AS   PS  SP   H    
Sbjct: 355 FLGYSLKHKGYKCM-FSNGRVYISRDVIFNETSFSYSKTIQASSCLPSTVSPSTSH---- 409

Query: 72  QTQPSSSPIQPSPI--PTHLPSPIQPSST 98
                 SP  P PI  PT LP+P  P S+
Sbjct: 410 -----LSPSAPPPILSPTMLPAPTSPISS 433


Top