BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0210.1
(70 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006473408.1 PREDICTED: WD repeat-containing protein 86 [Citru... 55 2e-07
XP_006434893.1 hypothetical protein CICLE_v10001155mg [Citrus cl... 55 2e-07
XP_002510317.1 PREDICTED: uncharacterized WD repeat-containing p... 50 1e-05
>XP_006473408.1 PREDICTED: WD repeat-containing protein 86 [Citrus sinensis]
Length = 446
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 1 MFAQTNSIPRSKFGALLHSDPLINSSSNNNNDDDDDQYSITSSTAPSPGPHYEDRNRFIV 60
MFA ++SI RSKFG +LHSDP N SS ND+D ++I S+A + P + D +R
Sbjct: 9 MFANSSSISRSKFGNILHSDP--NMSSATANDED---FTIRPSSASAVSPGFYDPSRMSC 63
Query: 61 ENSPYNNMSP 70
E SP MSP
Sbjct: 64 EGSPM-TMSP 72
>XP_006434893.1 hypothetical protein CICLE_v10001155mg [Citrus clementina]
ESR48133.1 hypothetical protein CICLE_v10001155mg
[Citrus clementina]
Length = 446
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 1 MFAQTNSIPRSKFGALLHSDPLINSSSNNNNDDDDDQYSITSSTAPSPGPHYEDRNRFIV 60
MFA ++SI RSKFG +LHSDP N SS ND+D ++I S+A + P + D +R
Sbjct: 9 MFANSSSISRSKFGNILHSDP--NMSSATANDED---FTIRPSSASAVSPGFYDPSRMSC 63
Query: 61 ENSPYNNMSP 70
E SP MSP
Sbjct: 64 EGSPM-TMSP 72
>XP_002510317.1 PREDICTED: uncharacterized WD repeat-containing protein alr3466
[Ricinus communis] EEF52504.1 F-box and wd40 domain
protein, putative [Ricinus communis]
Length = 470
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 11/71 (15%)
Query: 5 TNSIPRSKFGALLHSDPLINSSSNNNNDDDDDQYSITSSTAPSPGPHYEDRNRFIVEN-- 62
+N+IPRSKFG ++HSDP ++S+ N D+ +SI +S+A + P + D NR E
Sbjct: 17 SNTIPRSKFGNIMHSDPNMSSTVN------DEDFSIRNSSASAVTPGFFDPNRLSCEGSP 70
Query: 63 ---SPYNNMSP 70
SP+NN SP
Sbjct: 71 MTMSPWNNTSP 81