BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0390.1
(163 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angul... 230 2e-74
BAD34493.1 Gag-Pol [Ipomoea batatas] 245 2e-72
KYP53032.1 Retrovirus-related Pol polyprotein from transposon TN... 240 1e-70
>KOM58517.1 hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 230 bits (587), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 140/212 (66%), Gaps = 49/212 (23%)
Query: 1 MSRVPYASVVGSLMFDMVCTRLDIAQAVGA------------------------------ 30
+SRVPYAS VGSLM+ M+CTR DIA AVGA
Sbjct: 3 ISRVPYASAVGSLMYAMICTRPDIAHAVGAVSRFMANPGEEHWNAVKRVLRYIKGTSDVA 62
Query: 31 -------------------GDLDKSKSTTGYVFTLVRGAVSWVSKLQSILTTSTTKAEYV 71
GDLDK KSTTGYVF L G VSW+SKLQ+++ STT+AEY+
Sbjct: 63 LCFGGSKFIVRGYVDSDYAGDLDKRKSTTGYVFKLAGGVVSWLSKLQTVVALSTTEAEYM 122
Query: 72 AATQSSKEATWLQMLLEELGHKQEKVTLFWDSQSVLHLAKNPAFHSRTKHIRVQYHFVRE 131
AATQ+ KEA W+Q LLEELGHKQ K+T++ DSQS LH+A+NPAFHSRTKHI VQYHFVRE
Sbjct: 123 AATQACKEAIWIQRLLEELGHKQNKITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVRE 182
Query: 132 KVEEGSISMEKIYTKENLADILTKPVHINKFV 163
VE+G + +EKI TK+NLAD++TKPV+ +KFV
Sbjct: 183 VVEKGDVDLEKICTKDNLADVMTKPVNTDKFV 214
>BAD34493.1 Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 245 bits (625), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 147/211 (69%), Gaps = 49/211 (23%)
Query: 1 MSRVPYASVVGSLMFDMVCTRLDIAQAVG------------------------------- 29
MSRVPYAS VGSLMF M+CTR DIAQAVG
Sbjct: 1076 MSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVA 1135
Query: 30 ------------------AGDLDKSKSTTGYVFTLVRGAVSWVSKLQSILTTSTTKAEYV 71
AGDLDKSKSTTGYVF + GAVSWVSKLQ+++ TSTT+AEYV
Sbjct: 1136 LCYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYV 1195
Query: 72 AATQSSKEATWLQMLLEELGHKQEKVTLFWDSQSVLHLAKNPAFHSRTKHIRVQYHFVRE 131
AATQ+SKEA WL+MLLEELGHKQE V+LF DSQS LHLA+NPAFHSRTKHIRVQYHF+RE
Sbjct: 1196 AATQASKEAIWLKMLLEELGHKQEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIRE 1255
Query: 132 KVEEGSISMEKIYTKENLADILTKPVHINKF 162
KV+EG++ ++KI+T +N+AD LTK ++++KF
Sbjct: 1256 KVKEGTVDLQKIHTADNVADFLTKIINVDKF 1286
>KYP53032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 240 bits (613), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 144/211 (68%), Gaps = 49/211 (23%)
Query: 1 MSRVPYASVVGSLMFDMVCTRLDIAQAVGA------------------------------ 30
MSRVPYAS VGSLM+ M+CTR DIAQAVGA
Sbjct: 1083 MSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVA 1142
Query: 31 -------------------GDLDKSKSTTGYVFTLVRGAVSWVSKLQSILTTSTTKAEYV 71
GDLDK KSTTGYVFTL GAVSW+SKLQ+++ STT+AEY+
Sbjct: 1143 LCFEGSEFVVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYM 1202
Query: 72 AATQSSKEATWLQMLLEELGHKQEKVTLFWDSQSVLHLAKNPAFHSRTKHIRVQYHFVRE 131
AATQ+ KEA W+Q LLEELGHKQEK+T++ DSQS LH+A+NPAFHSRTKHI VQYHFVRE
Sbjct: 1203 AATQACKEAIWIQRLLEELGHKQEKITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVRE 1262
Query: 132 KVEEGSISMEKIYTKENLADILTKPVHINKF 162
VEEG + M+KI+TK+N+AD++TKPV+ +KF
Sbjct: 1263 VVEEGKVDMQKIHTKDNIADVMTKPVNTDKF 1293