BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0470.1
(98 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY77187.1 Transcription elongation factor B polypeptide 1 [Anan... 191 1e-61
XP_010256762.1 PREDICTED: transcription elongation factor B poly... 188 1e-60
XP_010905395.1 PREDICTED: transcription elongation factor B poly... 188 2e-60
>OAY77187.1 Transcription elongation factor B polypeptide 1 [Ananas comosus]
Length = 98
Score = 191 bits (484), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 95/98 (96%)
Query: 1 MKKEETVTLISAEGFEFVIDRKAAMVSQTIRNMLTSPGGFAESQLGRVTFPEISTVILEK 60
MKKE+TV LISAEGFEFV+D+KAAMVSQTIRNMLTSPGGFAE+QLG VTFPEIST ILEK
Sbjct: 1 MKKEDTVKLISAEGFEFVVDKKAAMVSQTIRNMLTSPGGFAETQLGEVTFPEISTPILEK 60
Query: 61 ICQYFYWSLQFASGKETEFHIEPEITLELMMAANYLHT 98
ICQYFYWSLQ+ASGKETEFHIEPEITLELMMAANYLHT
Sbjct: 61 ICQYFYWSLQYASGKETEFHIEPEITLELMMAANYLHT 98
>XP_010256762.1 PREDICTED: transcription elongation factor B polypeptide 1
[Nelumbo nucifera]
Length = 98
Score = 188 bits (477), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 89/98 (90%), Positives = 94/98 (95%)
Query: 1 MKKEETVTLISAEGFEFVIDRKAAMVSQTIRNMLTSPGGFAESQLGRVTFPEISTVILEK 60
MKKEETV LISAEGFEFVID+KAAMVSQTIRNMLTSPG FAE+Q G VTFPEIST+ILEK
Sbjct: 1 MKKEETVKLISAEGFEFVIDKKAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTIILEK 60
Query: 61 ICQYFYWSLQFASGKETEFHIEPEITLELMMAANYLHT 98
ICQYFYWSLQFASGKETEFHIEPE++LELMMAANYLHT
Sbjct: 61 ICQYFYWSLQFASGKETEFHIEPELSLELMMAANYLHT 98
>XP_010905395.1 PREDICTED: transcription elongation factor B polypeptide 1-like
[Elaeis guineensis]
Length = 98
Score = 188 bits (477), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 90/98 (91%), Positives = 93/98 (94%)
Query: 1 MKKEETVTLISAEGFEFVIDRKAAMVSQTIRNMLTSPGGFAESQLGRVTFPEISTVILEK 60
MKKEETV LISAEGFEFVID+KAAMVS TIRNMLTSPGGFAE+QLG VTFPEIST ILEK
Sbjct: 1 MKKEETVKLISAEGFEFVIDKKAAMVSHTIRNMLTSPGGFAETQLGEVTFPEISTPILEK 60
Query: 61 ICQYFYWSLQFASGKETEFHIEPEITLELMMAANYLHT 98
ICQYFYWSLQ+ SGKETEFHIEPEITLELMMAANYLHT
Sbjct: 61 ICQYFYWSLQYTSGKETEFHIEPEITLELMMAANYLHT 98