BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0490.1
(213 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY82868.1 putative ribonuclease H protein [Ananas comosus] 82 2e-15
OAY70583.1 putative ribonuclease H protein [Ananas comosus] 79 8e-15
XP_017184705.1 PREDICTED: uncharacterized protein LOC108172102 [... 77 2e-14
>OAY82868.1 putative ribonuclease H protein [Ananas comosus]
Length = 259
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 48 VSPHPSQLETKVQTWRPPSTPYLKINIDASFINLNERAGIGCIIRDADANYVIAAADSVR 107
SP P E V +WRPP ++K+N D SF+ G G + RD++ +V A A S
Sbjct: 70 ASPPPPGFEL-VVSWRPPPDGWVKLNTDGSFVGRGSSGGAGFVARDSEGLFVFAGASS-- 126
Query: 108 SQHAECESMTILSGLLWAIQLQIS--------HVHLESDNQALILFLNG---NSVGFHWQ 156
C + L LWAI+ ++ V LESD+ + + L G N+
Sbjct: 127 -----CPGVNPLYSELWAIRAALTRAIEAGFPRVLLESDSSSAVDLLGGRIKNANAAPRG 181
Query: 157 SQRVIQQIIDIKDKFKGLIFSHVPRECNTQADAIAKWGRKYCHKKIW 203
++R++Q + ++ +F+ +I H RE N AD +A GR+ + +
Sbjct: 182 TKRLVQDCLALRCRFREIIIQHTYREGNRVADRLAALGRRSGQDRFY 228
>OAY70583.1 putative ribonuclease H protein [Ananas comosus]
Length = 181
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 55 LETKVQTWRPPSTPYLKINIDASFINLNERAGIGCIIRDADANYVIAAADSVRS-QHAEC 113
++ + +WRPP ++K+N D SF++ + G G + RD + +++ A A R
Sbjct: 1 MKNNLVSWRPPPEGWVKLNADGSFVSRDSNGGAGFVARDCNGHFLFAGASDCRGVDPLYS 60
Query: 114 ESMTILSGLLWAIQLQISHVHLESDNQALILFLNGN-SVGFHWQSQRVIQQIIDIKDKFK 172
E I S L A + + V LESD+ + + + G S S++++QQ D++D F
Sbjct: 61 ELCGIRSALTEAKKAGLPRVILESDSSSAVHLVGGGISKNAPRGSKQLVQQCQDLRDSFP 120
Query: 173 GLIFSHVPRECNTQADAIAKWGRKYCHKKIW 203
+I H RE N+ AD +A GR+ + +
Sbjct: 121 EIIIQHTYRESNSVADRLAAVGRQSGRTQFF 151
>XP_017184705.1 PREDICTED: uncharacterized protein LOC108172102 [Malus domestica]
Length = 154
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 53 SQLETKVQTWRPPSTPYLKINIDASFINLNERAGIGCIIRDADANYVIAAADSVRSQHA- 111
S+ V W P +PYLK+N+DAS+ +G +IRD + +V AA ++++ +
Sbjct: 4 SRTVAPVAHWSPSFSPYLKVNVDASWQKSTRNGYVGVVIRDVEGQFVAAARYAIQTPNVV 63
Query: 112 ECESMTILSGLLWAIQLQISHVHLESDNQALILFLNGNSVGFHWQSQRVIQQIIDIKDKF 171
E+M IL G AI L V +ESD++ LI L+ + W++ + ++ +++ F
Sbjct: 64 SAEAMAILRGCELAIALGHQWVIVESDSKELISSLSSSLDNGRWEAFPTLANVLRLQESF 123
Query: 172 KGLIFSHVPRECNTQADAIA 191
+G +S VPR N AD +A
Sbjct: 124 QGCRWSWVPRSANLAADRLA 143