BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0600.1
(108 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013668905.1 PREDICTED: uncharacterized protein LOC106373248 [... 117 8e-32
XP_013615148.1 PREDICTED: uncharacterized protein LOC106321424 [... 117 9e-32
XP_013668906.1 PREDICTED: uncharacterized protein LOC106373249 [... 117 1e-31
>XP_013668905.1 PREDICTED: uncharacterized protein LOC106373248 [Brassica napus]
Length = 156
Score = 117 bits (294), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 64/84 (76%)
Query: 25 WHEYFKDAVGAIDGTHIRAKVPIKDQPRYRNRKAYISQNVLVACGFDMKFHYVLAGWEGS 84
++ YFKD +GAIDGTHI A +P D P YRNRK +ISQNV AC FD++F YVL+GWEGS
Sbjct: 18 FYPYFKDCIGAIDGTHIFAMIPTSDVPSYRNRKEFISQNVFDACNFDLEFMYVLSGWEGS 77
Query: 85 AHDGRLLRCAVSCSGRKLTVPPGM 108
AHD ++L A++ G +LTVP GM
Sbjct: 78 AHDSKILSNALTRHGSRLTVPEGM 101
>XP_013615148.1 PREDICTED: uncharacterized protein LOC106321424 [Brassica oleracea
var. oleracea]
Length = 156
Score = 117 bits (294), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 6 IVKPATSANSPSDGNRRQAWHEYFKDAVGAIDGTHIRAKVPIKDQPRYRNRKAYISQNVL 65
+VKP + + + R ++ YFKD +GAIDGTHI A +P D P YRNRK +ISQNVL
Sbjct: 1 MVKPGVATAAKISESTR--FYPYFKDCIGAIDGTHIFAMIPTSDVPSYRNRKGFISQNVL 58
Query: 66 VACGFDMKFHYVLAGWEGSAHDGRLLRCAVSCSGRKLTVPPGM 108
AC FD++F YVL+GWEGSAHD ++L A++ +LTVP GM
Sbjct: 59 AACNFDLEFMYVLSGWEGSAHDSKILSNALTRHCSRLTVPEGM 101
>XP_013668906.1 PREDICTED: uncharacterized protein LOC106373249 [Brassica napus]
Length = 156
Score = 117 bits (293), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Query: 6 IVKPATSANSPSDGNRRQAWHEYFKDAVGAIDGTHIRAKVPIKDQPRYRNRKAYISQNVL 65
+VKP + + + R ++ YFKD +GAIDGTHI A +P D P YRNRK +ISQNVL
Sbjct: 1 MVKPGVATAAKISESTR--FYPYFKDCIGAIDGTHIFAMIPTSDVPSYRNRKGFISQNVL 58
Query: 66 VACGFDMKFHYVLAGWEGSAHDGRLLRCAVSCSGRKLTVPPGM 108
AC FD++F YVL+GWEGSAHD + L A++ +LTVP GM
Sbjct: 59 AACNFDLEFMYVLSGWEGSAHDSKFLSNALTRHCSRLTVPEGM 101