BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0820.1
(191 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY70583.1 putative ribonuclease H protein [Ananas comosus] 62 6e-09
GAU48830.1 hypothetical protein TSUD_190600 [Trifolium subterran... 62 2e-08
KYP51964.1 hypothetical protein KK1_026174, partial [Cajanus cajan] 60 3e-08
>OAY70583.1 putative ribonuclease H protein [Ananas comosus]
Length = 181
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 28 LQEWIISWKDIDED-SQINVDASFIDVTGNAGVGCFMQDEHSVFVAAAACEVRGQNAEEC 86
++ ++SW+ E ++N D SF+ N G G +D + F+ A A + RG +
Sbjct: 1 MKNNLVSWRPPPEGWVKLNADGSFVSRDSNGGAGFVARDCNGHFLFAGASDCRGVDPLYS 60
Query: 87 ECWAIIKALQWAKFNNIPCIRIESDNLNIIRRIRQDES-TVYWQSENLMQIIYQLPNELV 145
E I AL AK +P + +ESD+ + + + S S+ L+Q L +
Sbjct: 61 ELCGIRSALTEAKKAGLPRVILESDSSSAVHLVGGGISKNAPRGSKQLVQQCQDLRDSFP 120
Query: 146 EVVFSFIPRESNTWADQLAKWGR 168
E++ RESN+ AD+LA GR
Sbjct: 121 EIIIQHTYRESNSVADRLAAVGR 143
>GAU48830.1 hypothetical protein TSUD_190600 [Trifolium subterraneum]
Length = 298
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 22 SKQINSLQEWIISWKDIDEDSQ-INVDASFIDVTGNAGVGCFMQDEHSVFVAAAACEVRG 80
S + + +++W E + +NVD S + T AG G ++D + VF++
Sbjct: 120 SSMATTAKPRLVTWTKPAEGTVCLNVDGSLLKATNTAGYGGLIRDSNGVFLSGFYGTATV 179
Query: 81 QNAEECECWAIIKALQ--W-AKFNNIPCIRIESDNLNIIRRIRQDESTVYWQSENLMQII 137
Q+ E A++ LQ W + F I C SD+L I+ IR D + + + N + II
Sbjct: 180 QSILFAELMAVLHGLQICWESGFRRITCF---SDSLQIVNLIR-DGVSAHHRFSNEVFII 235
Query: 138 YQLPNELVEVVFSFIPRESNTWADQLAKWGRTHEGNWMWIS 178
+QL + EVV RE N AD LAK G + + IS
Sbjct: 236 HQLLAKDWEVVIGHTFREGNACADVLAKMGAASDSTLVTIS 276
>KYP51964.1 hypothetical protein KK1_026174, partial [Cajanus cajan]
Length = 154
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 45 NVDASFIDVTGNAGVGCFMQDEHSVFVAAAACEVRGQNAEECECWAIIKALQWAKFNNIP 104
N D +F + A G +D ++ V A V ++A E + AII A+Q A+
Sbjct: 1 NTDGAFSTLFSLASCGIIFRDSRAILVGCLAESVMAKSALEAKVLAIIHAVQIARSRGWM 60
Query: 105 CIRIESDNLNIIRRIRQDE---STVYWQSENLMQIIYQLPNELVEVVFSFIPRESNTWAD 161
+ IE+D+L IR Q S++Y Q N++ + Q+ + FS I RE N +AD
Sbjct: 61 SLWIETDSLLAIRAFTQPSLVPSSLYVQWLNMLFHVRQM-----RLRFSHIFREGNGYAD 115
Query: 162 QLAKWGRTHEGNWMWI 177
LA +G H G W+
Sbjct: 116 SLAGFGLRHVGYHWWL 131