BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000113.1_g0940.1
(173 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010682064.1 PREDICTED: uncharacterized protein LOC104896968 [... 102 5e-23
ABD63142.1 Retrotransposon gag protein [Asparagus officinalis] 101 9e-22
XP_010678061.1 PREDICTED: uncharacterized protein LOC104893627 [... 96 4e-20
>XP_010682064.1 PREDICTED: uncharacterized protein LOC104896968 [Beta vulgaris
subsp. vulgaris]
Length = 324
Score = 102 bits (253), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 24/178 (13%)
Query: 2 KLVQLLYEGLDYPTTSMIESFCNGRFSNKSADEAMDFLEELAAQSQQWETSREPITRA-- 59
+L Q++YEGLD + +M+ES C G F K+ DEA +FLE+LA ++ QWET+R +
Sbjct: 165 RLCQIVYEGLDPNSRTMLESMCQGNFLGKTIDEAWEFLEDLADKTLQWETTRADSSSLPD 224
Query: 60 KPNPTKGGIYRIDD---YESKLDAITRRLEALVMNQPKTFTEDPTHVMSVGNEPLSYPCS 116
K + KGG+Y + D ES+L + +L+ L + Q S ++ S C+
Sbjct: 225 KISSAKGGLYNVSDNTYLESRLTLLENQLKRLSVPQ------------SQAHQIASLSCT 272
Query: 117 VCGDPTHTGNNCALFF-ESANKEQAHALYQNSRQDNRQKYDPFSNAYNPSWRNHPDLS 173
C H N C +S N + + +Q R DP+SN YNP WRNHP+ S
Sbjct: 273 HCHGVDHISNACPYIAPQSYNNIEVNMAFQRPRN------DPYSNTYNPGWRNHPNFS 324
>ABD63142.1 Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 2 KLVQLLYEGLDYPTTSMIESFCNGRFSNKSADEAMDFLEELAAQSQQWETSREPITRAKP 61
+L Q++YEGLDY + + +ES C G F K+ADEA +FLE L+ ++ QWE + ++
Sbjct: 95 RLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWENCDDRVSSVSQ 154
Query: 62 NPTKG-GIYRIDDYESKLDAITRRLEALVMNQPKTFTEDPTHVMSVGNEPLSYPCSVCGD 120
+ + G + E+K+ I RRLEAL + + H+ + G C C
Sbjct: 155 SKSSGLSLESNIASEAKMATILRRLEALEVKE--RAPAQINHISAPG-------CHNCQS 205
Query: 121 PTHTGNNCALFFESANKEQAHALYQNSRQDNRQKYDPFSNAYNPSWRNHPDLS 173
PTH C L + EQ +A +Q R DPFS YNP WRNHP+ +
Sbjct: 206 PTHVSEECPLLGNNHALEQMNAAFQRPRN------DPFSPTYNPGWRNHPNFA 252
>XP_010678061.1 PREDICTED: uncharacterized protein LOC104893627 [Beta vulgaris
subsp. vulgaris]
Length = 764
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 29/178 (16%)
Query: 4 VQLLYEGLDYPTTSMIESFCNGRFSNKSADEAMDFLEELAAQS-QQWETSREPITRAKPN 62
VQ Y GLD MI+S C G F K+ +EA + E L+ S Q +SR I+R+
Sbjct: 164 VQSFYSGLDERNQQMIDSSCGGTFFIKTPNEAWELFEHLSDNSLQHANSSRMGISRSL-- 221
Query: 63 PTKGGIYRID---DYESKLDAITRRLEALV----MNQPKTFTEDPTHVMSVGNEPLSYPC 115
+KGGIY I D SK++ +T++L+ L+ MN T + D C
Sbjct: 222 GSKGGIYEISHSPDLSSKVEVLTKKLDQLMAINNMNMNSTTSHD--------------VC 267
Query: 116 SVCGDPTHTGNNCALFFESANKEQAHALYQNSRQDNRQKYDPFSNAYNPSWRNHPDLS 173
S+C +P H +NC + + EQ N+ Q +P+SN YNP WRNHP+ S
Sbjct: 268 SICANPNHLSHNCPTIYSDVSHEQV-----NAAQGYPPHNNPYSNTYNPGWRNHPNFS 320