BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0120.1
(150 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABS11079.1 reverse transcriptase, partial [Malus domestica] 222 2e-72
XP_016467122.1 PREDICTED: uncharacterized protein LOC107789765 [... 233 1e-70
XP_017182954.1 PREDICTED: uncharacterized protein LOC108171396 [... 227 5e-67
>ABS11079.1 reverse transcriptase, partial [Malus domestica]
Length = 143
Score = 222 bits (565), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 120/141 (85%)
Query: 1 MCVDYRALNQVTIKDKFPIPVIDELLDKLHGANYFTKLDLRSGYHQIRMHPNDIEKTAFR 60
MCVDYRALN +TIKDK+PIP+IDELLD+L GA YF+KLDLR GYHQIR+HP DI KTAFR
Sbjct: 2 MCVDYRALNLLTIKDKYPIPLIDELLDELFGAKYFSKLDLRPGYHQIRIHPKDIGKTAFR 61
Query: 61 THQRHYEFLVMPFGLTNAPSTFQALMNEVFKEHLRKFILVFFDDILIYSRTWADHLHHLQ 120
T++RHYEFLVMPFGLTNAP++FQ+LMN +F +LRKFILVFFDDILIYS W HL HL
Sbjct: 62 TYERHYEFLVMPFGLTNAPASFQSLMNMIFMPYLRKFILVFFDDILIYSAYWELHLQHLS 121
Query: 121 ITLSVLQSHHLFVKIGEMPIW 141
I LS+L+ HHLFVK+ + W
Sbjct: 122 IALSILELHHLFVKLSKCVFW 142
>XP_016467122.1 PREDICTED: uncharacterized protein LOC107789765 [Nicotiana tabacum]
Length = 663
Score = 233 bits (594), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 107/135 (79%), Positives = 124/135 (91%)
Query: 1 MCVDYRALNQVTIKDKFPIPVIDELLDKLHGANYFTKLDLRSGYHQIRMHPNDIEKTAFR 60
MCVDYRALN+VTIKDKFPIPVIDELLD+LHGA++FTKLDLRSGYHQIR+HP+DIEK AFR
Sbjct: 455 MCVDYRALNKVTIKDKFPIPVIDELLDELHGASFFTKLDLRSGYHQIRVHPSDIEKIAFR 514
Query: 61 THQRHYEFLVMPFGLTNAPSTFQALMNEVFKEHLRKFILVFFDDILIYSRTWADHLHHLQ 120
THQ HYEFLVMPFGLTNAPSTFQ+LMNEVFK++LRKFILVFF D LIYS+ W +H+ HL+
Sbjct: 515 THQGHYEFLVMPFGLTNAPSTFQSLMNEVFKKYLRKFILVFFYDTLIYSKDWDEHMKHLE 574
Query: 121 ITLSVLQSHHLFVKI 135
+ S+L+ H LFVK+
Sbjct: 575 LVFSILKHHQLFVKM 589
>XP_017182954.1 PREDICTED: uncharacterized protein LOC108171396 [Malus domestica]
Length = 924
Score = 227 bits (579), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 120/134 (89%)
Query: 1 MCVDYRALNQVTIKDKFPIPVIDELLDKLHGANYFTKLDLRSGYHQIRMHPNDIEKTAFR 60
+C+DYR LN +TIKDK+PIP++D+LLD+LHGA YF+KLDLRSGYHQIRM P+D+EKTAFR
Sbjct: 648 LCMDYRELNSITIKDKYPIPLVDDLLDELHGAQYFSKLDLRSGYHQIRMSPSDVEKTAFR 707
Query: 61 THQRHYEFLVMPFGLTNAPSTFQALMNEVFKEHLRKFILVFFDDILIYSRTWADHLHHLQ 120
THQ HYEFLVMPFGLTNAP+TFQALMN++FK +LRKFILVFFDDIL+YS+TW DHL HL
Sbjct: 708 THQGHYEFLVMPFGLTNAPATFQALMNDIFKPYLRKFILVFFDDILVYSKTWEDHLSHLH 767
Query: 121 ITLSVLQSHHLFVK 134
TL +LQ H L VK
Sbjct: 768 QTLELLQKHQLAVK 781