BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0280.1
(279 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera] 283 7e-84
CAN61272.1 hypothetical protein VITISV_039063 [Vitis vinifera] 283 1e-83
KYP38864.1 Retrovirus-related Pol polyprotein from transposon TN... 263 1e-81
>CAN65222.1 hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 283 bits (725), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 168/241 (69%), Gaps = 3/241 (1%)
Query: 2 LTLIDDFSRKVWVYILNRKDEAFVKFKQWKTLIVKQTGKSIKRLRTDNGMEFCGNEFNRF 61
+T IDDFSRKVWVY L KDE F KFK+WKT++ K+TGK +K LRTDNG+EFC +F+ F
Sbjct: 614 VTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEF 673
Query: 62 CEDQGIVRHHTIRKTPQQNGVAERMNRTLLERTRCMLSNAGLSEVVWAKAVKTTAYLVNI 121
C +GIVRH T+R TPQQNGVAERMN+TL++R RCM +AGLS+ WA+AV T AYLVN
Sbjct: 674 CRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNR 733
Query: 122 SPCTFIEYKAPNEVWSSNSAKYENLRIFSCPVYAHVKEGKLDPRAKKWVFLDYEPGVKGY 181
SP T I++K P EVWS + Y L+IF CP YAHV +GKL+PRA K +FL Y GVKGY
Sbjct: 734 SPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGY 793
Query: 182 LVWNPDGISKKFLISRDVTFDELATVTQKVTPVDTRENVGKHVEREDHGKQVEFEIDTRK 241
+W + + KF+ISRDVTFDE A Q+ D G ++VEFE+D
Sbjct: 794 RLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDL---AGTSKTDLGANQKVEFEVDAPM 850
Query: 242 E 242
E
Sbjct: 851 E 851
>CAN61272.1 hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 283 bits (724), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 136/241 (56%), Positives = 168/241 (69%), Gaps = 3/241 (1%)
Query: 2 LTLIDDFSRKVWVYILNRKDEAFVKFKQWKTLIVKQTGKSIKRLRTDNGMEFCGNEFNRF 61
+T IDDFSRKVWVY L KDE F KFK+WKT++ K+TGK +K LRTDNG+EFC +F+ F
Sbjct: 827 VTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEF 886
Query: 62 CEDQGIVRHHTIRKTPQQNGVAERMNRTLLERTRCMLSNAGLSEVVWAKAVKTTAYLVNI 121
C +GIVRH T+R TPQQNGVAERMN+TL++R RCM +AGLS+ WA+AV T AYLVN
Sbjct: 887 CRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNR 946
Query: 122 SPCTFIEYKAPNEVWSSNSAKYENLRIFSCPVYAHVKEGKLDPRAKKWVFLDYEPGVKGY 181
SP T I++K P EVWS + Y L+IF CP YAHV +GKL+PRA K +FL Y GVKGY
Sbjct: 947 SPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGY 1006
Query: 182 LVWNPDGISKKFLISRDVTFDELATVTQKVTPVDTRENVGKHVEREDHGKQVEFEIDTRK 241
+W + + KF+ISRDVTFDE A Q+ D G ++VEFE+D
Sbjct: 1007 RLWCTEDRTPKFIISRDVTFDESAMFGQRKEFGDL---AGTSKTDLGANQKVEFEVDAPM 1063
Query: 242 E 242
E
Sbjct: 1064 E 1064
>KYP38864.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 507
Score = 263 bits (672), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 151/203 (74%), Gaps = 2/203 (0%)
Query: 1 MLTLIDDFSRKVWVYILNRKDEAFVKFKQWKTLIVKQTGKSIKRLRTDNGMEFCGNEFNR 60
L++IDD+SR W++I K++AF FK+WK L+ KQT K +KRLRTDNG+EFC EFN
Sbjct: 125 FLSIIDDYSRMTWIFITKHKNQAFKCFKEWKILMEKQTSKRVKRLRTDNGLEFCSKEFND 184
Query: 61 FCEDQGIVRHHTIRKTPQQNGVAERMNRTLLERTRCMLSNAGLSEVVWAKAVKTTAYLVN 120
+C+ +GI R +T+R TPQQNGVAERMNRTLLER RC+LSNAGLS WA+AV TT YL+N
Sbjct: 185 YCKAEGIARQYTVRNTPQQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAVSTTCYLIN 244
Query: 121 ISPCTFIEYKAPNEVWSSNSAKYENLRIFSCPVYAHVKEGKLDPRAKKWVFLDYEPGVKG 180
SP T I+ K P EVWS+ A Y LR+F C Y HV EGKL+PR+KK +F+ Y GVKG
Sbjct: 245 RSPSTIIDCKTPIEVWSNKPANYSLLRVFGCNAYYHVNEGKLEPRSKKGLFMGYGDGVKG 304
Query: 181 YLVWNPDGISKKFLISRDVTFDE 203
Y +W+P +K ++SRDV FDE
Sbjct: 305 YRIWSP--AERKVILSRDVIFDE 325