BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0420.1
(83 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017258811.1 PREDICTED: T-complex protein 1 subunit theta [Dau... 154 1e-42
KZM92756.1 hypothetical protein DCAR_019879 [Daucus carota subsp... 154 1e-42
XP_004141139.1 PREDICTED: T-complex protein 1 subunit theta [Cuc... 152 4e-42
>XP_017258811.1 PREDICTED: T-complex protein 1 subunit theta [Daucus carota subsp.
sativus]
Length = 546
Score = 154 bits (388), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 1 MEIISSLYAENAAGNTKVGIDLEEGACKDSSTMDIWDLHVTKFFALKYAADAVCTVLRVD 60
MEIIS+LYAE+A+GNTKVGIDLEEGACKD STM IWDLHVTKFFALKYAADAVCTVLRVD
Sbjct: 463 MEIISTLYAEHASGNTKVGIDLEEGACKDISTMSIWDLHVTKFFALKYAADAVCTVLRVD 522
Query: 61 QIIMAKQAGGPRREQQPAGN-DED 83
QIIMAK AGGPRR+ QPAG DED
Sbjct: 523 QIIMAKPAGGPRRDAQPAGPMDED 546
>KZM92756.1 hypothetical protein DCAR_019879 [Daucus carota subsp. sativus]
Length = 543
Score = 154 bits (388), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 1 MEIISSLYAENAAGNTKVGIDLEEGACKDSSTMDIWDLHVTKFFALKYAADAVCTVLRVD 60
MEIIS+LYAE+A+GNTKVGIDLEEGACKD STM IWDLHVTKFFALKYAADAVCTVLRVD
Sbjct: 460 MEIISTLYAEHASGNTKVGIDLEEGACKDISTMSIWDLHVTKFFALKYAADAVCTVLRVD 519
Query: 61 QIIMAKQAGGPRREQQPAGN-DED 83
QIIMAK AGGPRR+ QPAG DED
Sbjct: 520 QIIMAKPAGGPRRDAQPAGPMDED 543
>XP_004141139.1 PREDICTED: T-complex protein 1 subunit theta [Cucumis sativus]
KGN59759.1 hypothetical protein Csa_3G843780 [Cucumis
sativus]
Length = 545
Score = 152 bits (384), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 70/83 (84%), Positives = 77/83 (92%)
Query: 1 MEIISSLYAENAAGNTKVGIDLEEGACKDSSTMDIWDLHVTKFFALKYAADAVCTVLRVD 60
MEIISSLYAE+A+GNT+VGIDLEEG CKD STM+IWDL++TKFFALKYAADAVCTVLRVD
Sbjct: 463 MEIISSLYAEHASGNTRVGIDLEEGICKDVSTMNIWDLYITKFFALKYAADAVCTVLRVD 522
Query: 61 QIIMAKQAGGPRREQQPAGNDED 83
QIIM+K AGGPRR QPAG DED
Sbjct: 523 QIIMSKPAGGPRRGDQPAGMDED 545