BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0450.1
(201 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP44095.1 Retrovirus-related Pol polyprotein from transposon TN... 188 9e-57
KYP64927.1 Retrovirus-related Pol polyprotein from transposon TN... 194 1e-56
CAN72527.1 hypothetical protein VITISV_009255 [Vitis vinifera] 199 7e-56
>KYP44095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 242
Score = 188 bits (477), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 117/188 (62%), Gaps = 12/188 (6%)
Query: 1 MQTRLKSGIVKPKGIPDHVTHFTTPHALHTSYIAALHPIHEPKTYKIAAQNENWVQAMKA 60
M TR K+GI KPK + + H + EP T K A W++AMK
Sbjct: 1 MTTRSKAGIFKPKTYAAALVKSSYDHTI------------EPNTVKEALAKPEWLKAMKD 48
Query: 61 EYQALIQNHTWVLTPKLPTMNILGCKWVFKVKYNSDGSLERYKARLVAQGYTPQEGVDYQ 120
EYQAL+ N TW L +GCKW+FK KYN DGS +R+KARLVA+GY + G+D+
Sbjct: 49 EYQALVSNQTWSLVDLPIGYKPIGCKWIFKSKYNPDGSFQRHKARLVAKGYNQKPGLDFS 108
Query: 121 ETFSPVVKIQTVRVTLTLAVTNQWPIQQLDVSNAFLHGDLHEAVYMKQPPGFEDPKHLTM 180
ETFSPVVK TVR+ L+LA+TNQWPI Q+D++NAFLHGDL E+VYM QPPGF +
Sbjct: 109 ETFSPVVKPTTVRIVLSLAITNQWPIHQIDINNAFLHGDLQESVYMSQPPGFNTQHKDKV 168
Query: 181 CVCCKNLY 188
C K +Y
Sbjct: 169 CKLNKAIY 176
>KYP64927.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 470
Score = 194 bits (493), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 122/188 (64%), Gaps = 18/188 (9%)
Query: 1 MQTRLKSGIVKPKGIPDHVTHFTTPHALHTSYIAALHPIHEPKTYKIAAQNENWVQAMKA 60
MQTR KSGI KPK Y + L EPK K A ++ W++AMK
Sbjct: 1 MQTRSKSGIHKPK------------------YPSVLLAQSEPKNVKQALKDPKWLEAMKK 42
Query: 61 EYQALIQNHTWVLTPKLPTMNILGCKWVFKVKYNSDGSLERYKARLVAQGYTPQEGVDYQ 120
EY AL++N+TW L P N +GCKWVF++K NSDGS+ RYKARLVA+G+ Q G D+
Sbjct: 43 EYSALLKNNTWTLVQLPPDRNAIGCKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFN 102
Query: 121 ETFSPVVKIQTVRVTLTLAVTNQWPIQQLDVSNAFLHGDLHEAVYMKQPPGFEDPKHLTM 180
ETFSPV+K T+R+ LTLA++N W I QLDV+NAFL+G L+E VYM+QPPGFE P +
Sbjct: 103 ETFSPVIKPVTIRLILTLAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFEVPDSTLV 162
Query: 181 CVCCKNLY 188
C K LY
Sbjct: 163 CKSNKALY 170
>CAN72527.1 hypothetical protein VITISV_009255 [Vitis vinifera]
Length = 1095
Score = 199 bits (507), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 131/189 (69%), Gaps = 7/189 (3%)
Query: 1 MQTRLKSGIVKPKGIPDHVTHFTTPHALHTSYIAALHPIHEPKTYKIAAQNENWVQAMKA 60
M TR KSGI KP+ P H++ + +H AL EPK +K AA+N W+ M
Sbjct: 546 MITRAKSGIFKPQH-PVHLSFVQSSPLIH-----ALLATFEPKGFKSAAKNPAWLATMDD 599
Query: 61 EYQALIQNHTWVLTPKLPTMNILGCKWVFKVKYNSDGSLERYKARLVAQGYTPQEGVDYQ 120
E +AL NHTW L P+ NI+G KWVF+ K+ SDGS+ER+KARLVA+GYT G+DY+
Sbjct: 600 EIKALQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSDGSIERFKARLVAKGYTQLPGLDYK 659
Query: 121 ETFSPVVKIQTVRVTLTLAVTNQWPIQQLDVSNAFLHGDLHEAVYMKQPPGFEDPKH-LT 179
+TFSPVVK TVRV L+LAV+++WP++QLDV N FL+G LHE VYM+QPPG+ DP+H L
Sbjct: 660 DTFSPVVKASTVRVVLSLAVSHKWPLRQLDVKNVFLNGILHETVYMEQPPGYVDPRHPLH 719
Query: 180 MCVCCKNLY 188
+C K LY
Sbjct: 720 VCKLKKALY 728