BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0690.1
(143 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009140270.1 PREDICTED: putative ribonuclease H protein At1g65... 65 9e-10
XP_008240491.1 PREDICTED: uncharacterized protein LOC103338992 [... 62 8e-09
XP_007212745.1 hypothetical protein PRUPE_ppa019461mg, partial [... 60 2e-08
>XP_009140270.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 866
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 14 FDASFVNVTSNTGISLIAHNAESKFIEA-QVQTSRARNSEESEAMAILYDMVWAKEQNYK 72
+D SF N+ + + ++ F A Q +T + N+ ESE A+L M+ Q Y
Sbjct: 718 YDGSFYNINTPAQAGWLIRDSTGLFKGAGQFKTRKPHNALESELQALLGAMMICWSQGYT 777
Query: 73 SIIIESDNMNLIKHIHNKR---NTVHWQLLIHIRRIRETRREFEIVQFKYTRRELNSQAD 129
+I E DN+N+I + + N V+W +R I + ++FE +Q+ +T RE NS AD
Sbjct: 778 KVIFEGDNINVINLLKKRTKNINVVNW-----LRDIWKWEQKFESLQYTWTNRESNSCAD 832
Query: 130 KLAK 133
LAK
Sbjct: 833 LLAK 836
>XP_008240491.1 PREDICTED: uncharacterized protein LOC103338992 [Prunus mume]
Length = 309
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 14 FDASFVNVTSNTGISLIAHNAESKFIEAQVQTSRARNSEESEAMAILYDMVWAKEQNYKS 73
FDA+++ + G LIA NA +F+ A+ + +A ++ +EA+A L WA E
Sbjct: 152 FDAAWLASSGKAGAGLIARNANGEFVGAKCLSFQAESAIMAEAIAGLEGCKWASELGLSK 211
Query: 74 IIIESDNMNLIKHIHNKRNT--VHWQLLIHIRRIRETRREFEIVQFKYTRRELNSQADKL 131
+ E D+ L++ K N W L I RIRE F + +T R+ N AD L
Sbjct: 212 VCFEFDSKELVEVQSVKGNIKRGRWNLYPLISRIRECNSIFSNCNWAWTGRKNNEAADHL 271
Query: 132 A 132
A
Sbjct: 272 A 272
>XP_007212745.1 hypothetical protein PRUPE_ppa019461mg, partial [Prunus persica]
EMJ13944.1 hypothetical protein PRUPE_ppa019461mg,
partial [Prunus persica]
Length = 229
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 10 PSLKF-----DASFVNVTSNTGISLIAHNAESKFIEAQVQTSRARNSEESEAMAILYDMV 64
PS+ F DA++ T G ++ N E +F+ A+ +A N+ +EA A+
Sbjct: 77 PSVPFVKINVDAAWRKNTCLAGAGIVIRNFEGRFLGAKSVDFQAENALIAEATALWEGCK 136
Query: 65 WAKEQNYKSIIIESDNMNLIKHIHNKRNTVHWQLLIHIRRIRETRREFEIVQFKYTRREL 124
+ KE+ + + ESD + LIK + W L + IR+ +R FE ++ +T R
Sbjct: 137 FPKERGHNMVCFESDYLELIKSVCGSFGRGSWTLYPILTLIRDEQRYFEECRWNWTTRNC 196
Query: 125 NSQADKLA 132
N D LA
Sbjct: 197 NQATDHLA 204