BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0730.1
(504 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006491472.1 PREDICTED: uncharacterized protein LOC102626455 [... 170 1e-41
ABB46931.2 retrotransposon protein, putative, unclassified [Oryz... 169 1e-41
AAM01179.2 Putative retroelement [Oryza sativa Japonica Group] 169 1e-41
>XP_006491472.1 PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 211/477 (44%), Gaps = 90/477 (18%)
Query: 103 VGAKLTSNARSWIKKLVSQSGRTVLIKSVLNSYCQYPFHILKIPKHVLNHLEQLERNFWW 162
V K+TS SW KL S G+ +LIK+V + Y + K+PK + +++ FWW
Sbjct: 862 VKLKVTSKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQKEIARFWW 921
Query: 163 GQTSNEHKMHFMNWNIISSSKDQGGLGIRKLEYVNESLLAKTVWRLLNHPEAIWVQILKG 222
G ++H +H+ W+ +S +K +GGLG R L N++L+AK WRL+ +P ++ +++K
Sbjct: 922 GTKKDKHGIHWARWDSMSKAKRRGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKA 981
Query: 223 EYYHSTDFWSSNSRKSHTPFWNSILQVKNTIHHNSHWLVGNGSEINILSDTWIPTTITQT 282
YY ++ FW++ + + W SIL I W +G+G ++ + D WIP T
Sbjct: 982 RYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQ 1041
Query: 283 PIIIMDLPNNIKKVSDLINQDSKTWKQDILTQYFDQSSVQEIININIPSSR----IISKH 338
PI LP+ V+DLI+ ++K W+ D L Q+F + ++ I+ I +PS + ++
Sbjct: 1042 PISPKTLPHET-VVADLIDSENK-WRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHF 1099
Query: 339 TPTGKFTTKSYYATVNLTNQGF--------------------------KILIQQASVGI- 371
G+++ KS Y NQ F KI + +A I
Sbjct: 1100 DKKGEYSVKSGYQLA--LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNIL 1157
Query: 372 -------RRHATDNPIV--------TLTNLLEPGEANNKVW--------------KEFTY 402
+R + PI T++++L +A K+W ++F
Sbjct: 1158 PTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFS 1217
Query: 403 LI-------------------WYWWKARNDKHFKGKLIDYQTILHR----IALAERYHNP 439
I W W ARN F+GK D + + + + +R P
Sbjct: 1218 AIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKP 1277
Query: 440 NPLLHNNVVDLVQVNDWIPPPTGILKVNVDGSYSTT--RASARVVIRNSTGEELERG 494
+H + W PP +LK+NVD + ST + ++R++ G+ L G
Sbjct: 1278 GN-VHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVG 1333
>ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 205/421 (48%), Gaps = 51/421 (12%)
Query: 114 WIKKLVSQSGRTVLIKSVLNSYCQYPFHILKIPKHVLNHLEQLERNFWWGQTSNEHKMHF 173
W +K +S G+ +LIK+VL + Y + K+P+ V L +L RNFWWG + H+
Sbjct: 1314 WGEKFLSTGGKEILIKAVLQAMPVYVMGLFKLPESVCEELTKLVRNFWWGAEKGMRRTHW 1373
Query: 174 MNWNIISSSKDQGGLGIRKLEYVNESLLAKTVWRLLNHPEAIWVQILKGEYYHSTDFWSS 233
+W+ + + K +GG+G R N++LLA+ WRLL+ P+++ +ILK YY + +
Sbjct: 1374 KSWDCLIAQKLKGGMGFRDFRLFNQALLARQAWRLLDRPDSLCARILKAIYYPNGSLIDT 1433
Query: 234 NSRKSHTPFWNSILQVKNTIHHNSHWLVGNGSEINILSDTWIPTTITQTPIIIMDLPNNI 293
+ + +P W +I + W +GNG + + D WIP + ++ P I +
Sbjct: 1434 SFGGNASPGWRAIEYGLELLKKGIIWRIGNGKSVRLWRDPWIPRSYSRRP-ISAKRNCRL 1492
Query: 294 KKVSDLINQDSKTWKQDILTQYFDQSSVQEIININIPSSRI----ISKHT-PTGKFTTKS 348
+ VSDLI+Q S +W D ++Q+F + I+NI + SSR+ I+ H G+F+ +S
Sbjct: 1493 RWVSDLIDQ-SGSWDTDKISQHFLPMDAEAILNIRL-SSRLEDDFIAWHPDKLGRFSVRS 1550
Query: 349 -YYATVNLT-----------------NQGFKILIQQASVGIRRHATDNPIVTLTNLLEPG 390
Y+ V L N +K Q + +P V L +LLE
Sbjct: 1551 AYHLAVALAHVDEGSSSSGNGNSRAWNALWKCNAPQKLNPLSNIRNGDPKVIL-DLLEQS 1609
Query: 391 EANNKVWKEFTYLIWYWWKARND----KHFKGKLIDYQTI-LHRIALAERYHNP--NPLL 443
+ ++V ++W W RN+ K G L+ + I + ++LAE +P +P
Sbjct: 1610 QPEDQVM--LLMVLWRIWHTRNEIVHGKPAPGMLVSKRFIESYVLSLAEIKQHPQASPEK 1667
Query: 444 HNNVVDLVQ-------------VNDWIPPPTGILKVNVDGSY--STTRASARVVIRNSTG 488
+VVD+VQ + W+ P G +K+NVDGS+ S + V+RN TG
Sbjct: 1668 GKHVVDVVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTG 1727
Query: 489 E 489
E
Sbjct: 1728 E 1728
>AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 205/421 (48%), Gaps = 51/421 (12%)
Query: 114 WIKKLVSQSGRTVLIKSVLNSYCQYPFHILKIPKHVLNHLEQLERNFWWGQTSNEHKMHF 173
W +K +S G+ +LIK+VL + Y + K+P+ V L +L RNFWWG + H+
Sbjct: 1349 WGEKFLSTGGKEILIKAVLQAMPVYVMGLFKLPESVCEELTKLVRNFWWGAEKGMRRTHW 1408
Query: 174 MNWNIISSSKDQGGLGIRKLEYVNESLLAKTVWRLLNHPEAIWVQILKGEYYHSTDFWSS 233
+W+ + + K +GG+G R N++LLA+ WRLL+ P+++ +ILK YY + +
Sbjct: 1409 KSWDCLIAQKLKGGMGFRDFRLFNQALLARQAWRLLDRPDSLCARILKAIYYPNGSLIDT 1468
Query: 234 NSRKSHTPFWNSILQVKNTIHHNSHWLVGNGSEINILSDTWIPTTITQTPIIIMDLPNNI 293
+ + +P W +I + W +GNG + + D WIP + ++ P I +
Sbjct: 1469 SFGGNASPGWRAIEYGLELLKKGIIWRIGNGKSVRLWRDPWIPRSYSRRP-ISAKRNCRL 1527
Query: 294 KKVSDLINQDSKTWKQDILTQYFDQSSVQEIININIPSSRI----ISKHT-PTGKFTTKS 348
+ VSDLI+Q S +W D ++Q+F + I+NI + SSR+ I+ H G+F+ +S
Sbjct: 1528 RWVSDLIDQ-SGSWDTDKISQHFLPMDAEAILNIRL-SSRLEDDFIAWHPDKLGRFSVRS 1585
Query: 349 -YYATVNLT-----------------NQGFKILIQQASVGIRRHATDNPIVTLTNLLEPG 390
Y+ V L N +K Q + +P V L +LLE
Sbjct: 1586 AYHLAVALAHVDEGSSSSGNGNSRAWNALWKCNAPQKLNPLSNIRNGDPKVIL-DLLEQS 1644
Query: 391 EANNKVWKEFTYLIWYWWKARND----KHFKGKLIDYQTI-LHRIALAERYHNP--NPLL 443
+ ++V ++W W RN+ K G L+ + I + ++LAE +P +P
Sbjct: 1645 QPEDQVM--LLMVLWRIWHTRNEIVHGKPAPGMLVSKRFIESYVLSLAEIKQHPQASPEK 1702
Query: 444 HNNVVDLVQ-------------VNDWIPPPTGILKVNVDGSY--STTRASARVVIRNSTG 488
+VVD+VQ + W+ P G +K+NVDGS+ S + V+RN TG
Sbjct: 1703 GKHVVDVVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTG 1762
Query: 489 E 489
E
Sbjct: 1763 E 1763