BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0750.1
(113 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN76612.1 hypothetical protein VITISV_040104 [Vitis vinifera] 96 2e-23
XP_008351909.1 PREDICTED: transcription initiation factor TFIID ... 101 5e-23
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 100 3e-22
>CAN76612.1 hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 95.9 bits (237), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 71/105 (67%)
Query: 8 VKAGKYEIEKFNGKNDFSYWRMQMKKLLISQKLHKTLTGKKPGDMSDEDWEELDLEARAT 67
+ + K+++ KF+G +F W+ ++K LL+ Q + K L GK+P M++ DW++L+++ AT
Sbjct: 4 ISSAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQPEGMNNMDWKDLEVKVAAT 63
Query: 68 IMLCLERDVAFLVDGETTAASVWLKLESNFMMKTLTNWVYLKSKL 112
I LCL DV + V E + ++WLKLES +M K LTN +YLK KL
Sbjct: 64 IRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLYLKQKL 108
>XP_008351909.1 PREDICTED: transcription initiation factor TFIID subunit 2-like
[Malus domestica]
Length = 454
Score = 101 bits (251), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Query: 12 KYEIEKFNGKNDFSYWRMQMKKLLISQKLHKTLTGKK--PGDMSDEDWEELDLEARATIM 69
KY+IEKFNG+NDFS WR++M+ +L+ Q L K L G + P D S E+ E+ A + IM
Sbjct: 4 KYDIEKFNGRNDFSLWRVKMRAVLVQQGLLKALQGVEALPQDWSAEEKEDALNRAHSAIM 63
Query: 70 LCLERDVAFLVDGETTAASVWLKLESNFMMKTLTNWVYLKSKL 112
L L +V ++ ETTAA +WLKLES +M K+LTN +YLK +L
Sbjct: 64 LSLSDEVLREMENETTAAGLWLKLESIYMTKSLTNRLYLKQRL 106
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 99.8 bits (247), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 12 KYEIEKFNGKNDFSYWRMQMKKLLISQKLHKTLTGK--KPGDMSDEDWEELDLEARATIM 69
K++IEKF+GK FS W++QMK +L L K L GK KP +M+DE W+ELD +A + I
Sbjct: 6 KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQ 65
Query: 70 LCLERDVAFLVDGETTAASVWLKLESNFMMKTLTNWVYLKSKL 112
LCL ++V V ETTAA++WLKLES +M K+L N + LK +L
Sbjct: 66 LCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERL 108