BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0810.1
(96 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016202973.1 PREDICTED: chaperonin 60 subunit beta 4, chloropl... 144 8e-39
XP_015895291.1 PREDICTED: chaperonin 60 subunit beta 4, chloropl... 143 2e-38
XP_015895290.1 PREDICTED: chaperonin 60 subunit beta 4, chloropl... 142 8e-38
>XP_016202973.1 PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
[Arachis ipaensis]
Length = 581
Score = 144 bits (364), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 82/95 (86%), Gaps = 3/95 (3%)
Query: 1 MACSYSPTPISAASFSDSKLFTSTKRPSSLNIRATAKELHFNHDGSATRKLQAGVDMVAE 60
MACS P+PISA SF++S L + PS LN RA AKEL+FNHDGSAT+KL AGVDMVAE
Sbjct: 1 MACS--PSPISAFSFANSSL-PRPRTPSVLNPRAMAKELYFNHDGSATKKLLAGVDMVAE 57
Query: 61 LVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQV 95
L+GVTLGPKGRNVVLQNKYGPPKIVNDGETVLK++
Sbjct: 58 LLGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEI 92
>XP_015895291.1 PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
isoform X2 [Ziziphus jujuba]
Length = 537
Score = 143 bits (360), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 82/97 (84%), Gaps = 8/97 (8%)
Query: 4 SYSPTPISAASFSDSKLFTSTKRP-----SSLNIRATAKELHFNHDGSATRKLQAGVDMV 58
++SPT ISA SF++ L +KRP SSLN +A AKE++FNHDGS T+KLQAGVDMV
Sbjct: 2 AFSPTSISAISFTNPTL---SKRPYSPSSSSLNPKAMAKEVYFNHDGSVTKKLQAGVDMV 58
Query: 59 AELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQV 95
AELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQ+
Sbjct: 59 AELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQI 95
>XP_015895290.1 PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
isoform X1 [Ziziphus jujuba]
Length = 619
Score = 142 bits (358), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 82/97 (84%), Gaps = 8/97 (8%)
Query: 4 SYSPTPISAASFSDSKLFTSTKRP-----SSLNIRATAKELHFNHDGSATRKLQAGVDMV 58
++SPT ISA SF++ L +KRP SSLN +A AKE++FNHDGS T+KLQAGVDMV
Sbjct: 2 AFSPTSISAISFTNPTL---SKRPYSPSSSSLNPKAMAKEVYFNHDGSVTKKLQAGVDMV 58
Query: 59 AELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQV 95
AELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQ+
Sbjct: 59 AELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQI 95