BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0830.1
(554 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010261583.1 PREDICTED: ruBisCO large subunit-binding protein ... 868 0.0
XP_002269341.2 PREDICTED: chaperonin 60 subunit beta 4, chloropl... 867 0.0
XP_008243762.1 PREDICTED: chaperonin 60 subunit beta 4, chloropl... 867 0.0
>XP_010261583.1 PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Nelumbo nucifera]
Length = 589
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/580 (75%), Positives = 498/580 (85%), Gaps = 34/580 (5%)
Query: 6 SPTPISAASFSDSKLFTSTKRPSSLNIRATA--KELHFNHDGSATRKLQAGVDMVAELVG 63
S TPISA S S S L STKR SS + +A KEL+FNHDGS +KLQAGVD VAELVG
Sbjct: 5 SLTPISAISLSKSTLHNSTKRSSSSALSTSAMAKELYFNHDGSTMKKLQAGVDTVAELVG 64
Query: 64 VTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDPLENVGVKLVRQAGAKTNDLAGDG 123
VTLGPKGRNVVL+NKYGPPKIVNDG +VLK+I+LED LENVG KLVRQAGAKTNDLAGDG
Sbjct: 65 VTLGPKGRNVVLENKYGPPKIVNDGVSVLKEIQLEDQLENVGAKLVRQAGAKTNDLAGDG 124
Query: 124 STTSIILAQGLIAEGLKVTSAGMNPIQISRGIKKTAEALVSELKLMSKPVEDHELADVAA 183
STTS++LAQGLI EG+KV +AGMNPIQ+SRGI+ TA+ALV+ELKLMS+ VEDHELA+VAA
Sbjct: 125 STTSVVLAQGLITEGMKVIAAGMNPIQVSRGIENTAKALVAELKLMSREVEDHELANVAA 184
Query: 184 VSAGNDYIVGNMISDALLKVGRKGMVTIEKGKSTENSMEIVEGMQFDRGYLSPYFVTDRR 243
VSAGNDY+VGNMI+DAL +VG+KG+VTIEKG+ TENS++IVEGMQFDRGYLSPYFVTDR+
Sbjct: 185 VSAGNDYVVGNMIADALQQVGKKGVVTIEKGRCTENSLQIVEGMQFDRGYLSPYFVTDRQ 244
Query: 244 KKIVEYTNCKVLLVDKKVTNPKEMFKILDNAVQEKYPILIVAEGIEQEALAPVIRNKLRR 303
K VE+ NCK+LLVDKK+ NPKE+F+ILD AV+EKYPI+IVAEGIEQEALAP+IRNKLR
Sbjct: 245 KMSVEFHNCKLLLVDKKIINPKELFRILDGAVKEKYPIVIVAEGIEQEALAPIIRNKLRG 304
Query: 304 VLKAVAIKAPAFGERKSHYLDDIAILTGATVVRDEIGLILEKVGPEVLGTATKVVVTKDS 363
VLKA AIKAPAFGERKSHYLDDIAILTG TVVRD++GL LE+ G EVLGTA+KVV+TKDS
Sbjct: 305 VLKAAAIKAPAFGERKSHYLDDIAILTGGTVVRDDMGLTLERSGKEVLGTASKVVITKDS 364
Query: 364 TLIVTDGSTQSAVKERVTQIRNLVENTEENFQKNILNERIARLSGGIAILQVGAQTEVEL 423
TLIVTDGSTQ AV +RV+QIR LVENTE NFQK ILNERIARL GGIAI+QVGAQTEVEL
Sbjct: 365 TLIVTDGSTQPAVNKRVSQIRALVENTEGNFQKKILNERIARLCGGIAIIQVGAQTEVEL 424
Query: 424 KDKQLRIEDALNATKAAIEEGVVVGGGCSMLRLSLKVDNIKKGLENEEQKI--------- 474
KDKQLRIEDALNATKAAIEEG+VVGGGCS+LRLSLKV+NIK LENEEQKI
Sbjct: 425 KDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSLKVENIKDTLENEEQKIGADIFKRAL 484
Query: 475 ----------------------LSSDDATYGYNAAKDCYENLMAAGIIDPSKQVVRCCLE 512
LS DD YGYNAAKDCYE+L+AAGIIDP+K VVRCCLE
Sbjct: 485 SYPLRLIAKNAGGNGSVVVEKVLSIDDVRYGYNAAKDCYEDLIAAGIIDPTK-VVRCCLE 543
Query: 513 NAASVACTFLTSDLVVVEIKDLEPIPMRKPLPNSGIGPVG 552
+AASVA FLTSD+V+V+IK+LEP+PMRKP+P+SG+GPVG
Sbjct: 544 HAASVAKVFLTSDVVIVDIKELEPVPMRKPIPSSGVGPVG 583
>XP_002269341.2 PREDICTED: chaperonin 60 subunit beta 4, chloroplastic [Vitis
vinifera]
Length = 610
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/563 (78%), Positives = 489/563 (86%), Gaps = 32/563 (5%)
Query: 10 ISAASFSDSKLFTSTKRPSSLNIRATAKELHFNHDGSATRKLQAGVDMVAELVGVTLGPK 69
+SA SFS+ L + ++ N RA AKEL+FNHDGSAT+KLQAGVDMVAELVGVTLGPK
Sbjct: 2 VSALSFSNLTLPRRSFSTTAWNPRAMAKELYFNHDGSATKKLQAGVDMVAELVGVTLGPK 61
Query: 70 GRNVVLQNKYGPPKIVNDGETVLKQIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSII 129
GRNVVLQNKYGPPKIVNDGETVLK+IELEDPLENVGVKLVRQAGAKTN LAGDGSTTS+I
Sbjct: 62 GRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVI 121
Query: 130 LAQGLIAEGLKVTSAGMNPIQISRGIKKTAEALVSELKLMSKPVEDHELADVAAVSAGND 189
LA+GLIAEG+KV +AGMNPIQISRGI+KTA ALVSELKLMS+ VEDHELA VAAVSAGND
Sbjct: 122 LARGLIAEGVKVIAAGMNPIQISRGIEKTAMALVSELKLMSREVEDHELAHVAAVSAGND 181
Query: 190 YIVGNMISDALLKVGRKGMVTIEKGKSTENSMEIVEGMQFDRGYLSPYFVTDRRKKIVEY 249
Y VGNMISDA+ +VGR+G++TIEKGK ENS++IVEGMQFDRGYLSPYFVTDR+K +VE+
Sbjct: 182 YTVGNMISDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEF 241
Query: 250 TNCKVLLVDKKVTNPKEMFKILDNAVQEKYPILIVAEGIEQEALAPVIRNKLRRVLKAVA 309
+CK+LLVDKK+TNPKEMFKILDNAV+EKYPI+IVAEGIEQEALAPVIRNKLR VLKA A
Sbjct: 242 HDCKLLLVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAA 301
Query: 310 IKAPAFGERKSHYLDDIAILTGATVVRDEIGLILEKVGPEVLGTATKVVVTKDSTLIVTD 369
IKAPAFGERKSHYLDD+AILTG TV+ DE+GL LEK G EVLGTATKVV+TKDSTLIVTD
Sbjct: 302 IKAPAFGERKSHYLDDLAILTGGTVISDEMGLTLEKAGKEVLGTATKVVITKDSTLIVTD 361
Query: 370 GSTQSAVKERVTQIRNLVENTEENFQKNILNERIARLSGGIAILQVGAQTEVELKDKQLR 429
GSTQ AV++RV+QIR LVENTEENFQK ILNERIARLSGGIAILQVGAQT+VELKDKQLR
Sbjct: 362 GSTQPAVEKRVSQIRGLVENTEENFQKKILNERIARLSGGIAILQVGAQTQVELKDKQLR 421
Query: 430 IEDALNATKAAIEEGVVVGGGCSMLRLSLKVDNIKKGLENEEQKI--------------- 474
IEDA+NATKAAIEEGVVVGGGCS+LRLSLKVD IK+ L+NEEQKI
Sbjct: 422 IEDAVNATKAAIEEGVVVGGGCSLLRLSLKVDGIKELLDNEEQKIGAEIFKRALTYPARL 481
Query: 475 ----------------LSSDDATYGYNAAKDCYENLMAAGIIDPSKQVVRCCLENAASVA 518
LS+DD YGYNAA DCYE+LMAAGI+DPSK VVRCCLE+AASVA
Sbjct: 482 IAKNAGVNDSVVIEKVLSNDDFRYGYNAAIDCYEDLMAAGIMDPSK-VVRCCLEHAASVA 540
Query: 519 CTFLTSDLVVVEIKDLEPIPMRK 541
TFLTSD VVV+IK+L+ IP RK
Sbjct: 541 KTFLTSDAVVVDIKELDLIPRRK 563
>XP_008243762.1 PREDICTED: chaperonin 60 subunit beta 4, chloroplastic isoform X1
[Prunus mume]
Length = 625
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/576 (76%), Positives = 497/576 (86%), Gaps = 35/576 (6%)
Query: 4 SYSPTPISAASFSDSKLFTS-TKRPSSLNIRATAKELHFNHDGSATRKLQAGVDMVAELV 62
++SPTPIS+ SF++ L + PS++N + AK+L FNHDGSAT+KL AGVDMVAELV
Sbjct: 6 AFSPTPISSFSFTNPTLPRRISSVPSAVNSKGVAKDLIFNHDGSATKKLLAGVDMVAELV 65
Query: 63 GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDPLENVGVKLVRQAGAKTNDLAGD 122
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDP+ENVGVKLVRQAGAKTNDLAGD
Sbjct: 66 GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDPVENVGVKLVRQAGAKTNDLAGD 125
Query: 123 GSTTSIILAQGLIAEGLKVTSAGMNPIQISRGIKKTAEALVSELKLMSKPVEDHELADVA 182
GSTT++ILA GLI EG+KVT+AG+NPIQI+RGI+KTA ALVSELKL+S+ +EDHELA VA
Sbjct: 126 GSTTAVILAHGLITEGVKVTAAGLNPIQIARGIEKTAAALVSELKLISREIEDHELAHVA 185
Query: 183 AVSAGNDYIVGNMISDALLKVGRKGMVTIEKGKSTENSMEIVEGMQFDRGYLSPYFVTDR 242
AVSAGNDY VGNMI DALL+VG+KG+VTIE+GK TEN+++IVEGMQFDRGYLSPYFVTDR
Sbjct: 186 AVSAGNDYAVGNMIYDALLQVGKKGVVTIEQGKCTENNLQIVEGMQFDRGYLSPYFVTDR 245
Query: 243 RKKIVEYTNCKVLLVDKKVTNPKEMFKILDNAVQEKYPILIVAEGIEQEALAPVIRNKLR 302
R++IVE+ NCK+LLVDKK+TNPKEMFK+LDNAVQEKYP++IVAEGIEQEALAPVIRNKLR
Sbjct: 246 RRRIVEFQNCKLLLVDKKITNPKEMFKLLDNAVQEKYPMVIVAEGIEQEALAPVIRNKLR 305
Query: 303 RVLKAVAIKAPAFGERKSHYLDDIAILTGATVVRDEIGLILEKVGPEVLGTATKVVVTKD 362
VLKA AIKAPAFGERKSHYLDDIAILTG TVVRDE+G+ILE G EVLGTATKVV+TKD
Sbjct: 306 GVLKAAAIKAPAFGERKSHYLDDIAILTGGTVVRDEMGIILEDAGKEVLGTATKVVITKD 365
Query: 363 STLIVTDGSTQSAVKERVTQIRNLVENTEENFQKNILNERIARLSGGIAILQVGAQTEVE 422
STLIVTDGST+ AV++RV+QIR LVENTEE FQK ILNERIARLSGG+AILQVGAQT+VE
Sbjct: 366 STLIVTDGSTREAVEKRVSQIRKLVENTEEEFQKKILNERIARLSGGVAILQVGAQTQVE 425
Query: 423 LKDKQLRIEDALNATKAAIEEGVVVGGGCSMLRLSLKVDNIKKGLENEEQ---------- 472
LKDKQLRIEDALNATKAAIEEGVVVGGGCS+LRLS KVD IK+ L+NEEQ
Sbjct: 426 LKDKQLRIEDALNATKAAIEEGVVVGGGCSLLRLSKKVDGIKELLDNEEQKIGAEIFKRA 485
Query: 473 ---------------------KILSSDDATYGYNAAKDCYENLMAAGIIDPSKQVVRCCL 511
KILS+D+ YGYNAAKDCYE+LM AGI+DPSK VVRCCL
Sbjct: 486 LSYPVKLISKNAGVNGNVVVEKILSNDNMGYGYNAAKDCYEDLMKAGIMDPSK-VVRCCL 544
Query: 512 ENAASVACTFLTSDLVVVEIKDLEPIPMRKP--LPN 545
E+AASVA TFLTSD VVV+IK+ +P P R P LPN
Sbjct: 545 EHAASVAKTFLTSDAVVVDIKETQPFPRRMPPKLPN 580