BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0850.1
(287 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP76436.1 Retrovirus-related Pol polyprotein from transposon TN... 262 1e-78
KYP40338.1 Retrovirus-related Pol polyprotein from transposon TN... 261 1e-77
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN... 261 3e-76
>KYP76436.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 760
Score = 262 bits (669), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 179/295 (60%), Gaps = 49/295 (16%)
Query: 37 DRGMNFDTNSDKSKGNKGIITSYKEGNFGQVFLGDGEACYIIGVGDVNVKVNGSTWKLKN 96
D G +F S K + +Y GN G+V+LG+ ++C I+G G V +K+NGS W+LKN
Sbjct: 244 DSGASFHATSQKE-----LFENYVSGNLGKVYLGNEQSCEIVGKGVVKIKLNGSVWELKN 298
Query: 97 VRHVPNLTRNLVSVGQVCDDDCEIHFTKTNLKVAKGAMVLARGLRNGTLYRASERPTLVV 156
VRH+P+LT+NL+SVGQ+ D F K++KGAM +ARG ++GTLY+ +E L+
Sbjct: 299 VRHIPDLTKNLISVGQLASDGYTTIFQGEQWKISKGAMTIARGKKSGTLYKTTEACHLIT 358
Query: 157 ASNVEDVRLCHRRLGHMSEKNMK--------------------NSAFGRS---------- 186
+ ++ L H+RLGHMSEK MK + FG+
Sbjct: 359 VAANDNPNLWHQRLGHMSEKGMKIMHSKGKLPGLQSVEIEMCEDCIFGKQKRVSFQKGGR 418
Query: 187 --------------FAGADVSSHGGAQYFVTFIDDHSRKVWIYFLKHKSDVFDAFQKWKA 232
+ VSS G QYFVTFIDDHSRKVW+YFLKHKS+VF+AF+ WKA
Sbjct: 419 TPKKERLELVHSDVWGPTTVSSISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKA 478
Query: 233 LVETETGLKLKCIRSDNGGKYDKKEFLQLCATNGIRMERTLLGTPQENEVVERMN 287
+VE ETGLK+K +R+DNGG+Y+ F + C +GIRMERT+ GTPQ+N V ERMN
Sbjct: 479 MVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMN 533
>KYP40338.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 864
Score = 261 bits (667), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 179/295 (60%), Gaps = 49/295 (16%)
Query: 37 DRGMNFDTNSDKSKGNKGIITSYKEGNFGQVFLGDGEACYIIGVGDVNVKVNGSTWKLKN 96
D G +F S K + +Y GN G+V+LG+ ++C I+G G V +K+NGS W+LKN
Sbjct: 267 DSGASFHATSQKE-----LFENYVSGNLGKVYLGNEQSCEIVGKGVVKIKLNGSVWELKN 321
Query: 97 VRHVPNLTRNLVSVGQVCDDDCEIHFTKTNLKVAKGAMVLARGLRNGTLYRASERPTLVV 156
VRH+P+LT+NL+SVGQ+ D F K++KGAM +ARG ++GTLY+ +E L+
Sbjct: 322 VRHIPDLTKNLISVGQLASDGYTTIFQGEQWKISKGAMTIARGKKSGTLYKTTEACHLIT 381
Query: 157 ASNVEDVRLCHRRLGHMSEKNMK--------------------NSAFGRS---------- 186
+ ++ L H+RLGHMSEK MK + FG+
Sbjct: 382 VAANDNPNLWHQRLGHMSEKGMKIMHSKGKLPGLQSMEIEMCEDCIFGKQKRVSFQKGGR 441
Query: 187 --------------FAGADVSSHGGAQYFVTFIDDHSRKVWIYFLKHKSDVFDAFQKWKA 232
+ VSS G QYFVTFIDDHSRKVW+YFLKHKS+VF+AF+ WKA
Sbjct: 442 TPKKERLELVHSDVWGPTTVSSISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKA 501
Query: 233 LVETETGLKLKCIRSDNGGKYDKKEFLQLCATNGIRMERTLLGTPQENEVVERMN 287
+VE ETGLK+K +R+DNGG+Y+ F + C +GIRMERT+ GTPQ+N V ERMN
Sbjct: 502 MVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMN 556
>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1269
Score = 261 bits (668), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 133/295 (45%), Positives = 179/295 (60%), Gaps = 49/295 (16%)
Query: 37 DRGMNFDTNSDKSKGNKGIITSYKEGNFGQVFLGDGEACYIIGVGDVNVKVNGSTWKLKN 96
D G +F S K + +Y GN G+V+LG+ ++C I+G G V +K+NGS W+LKN
Sbjct: 267 DSGASFHATSQKE-----LFENYVSGNLGKVYLGNEQSCEIVGKGVVKIKLNGSVWELKN 321
Query: 97 VRHVPNLTRNLVSVGQVCDDDCEIHFTKTNLKVAKGAMVLARGLRNGTLYRASERPTLVV 156
VRH+P+LT+NL+SVGQ+ D F K++KGAM +ARG ++GTLY+ +E L+
Sbjct: 322 VRHIPDLTKNLISVGQLASDGYTTIFQGEQWKISKGAMTIARGKKSGTLYKTTEACHLIT 381
Query: 157 ASNVEDVRLCHRRLGHMSEKNMK--------------------NSAFGRS---------- 186
+ ++ L H+RLGHMSEK MK + FG+
Sbjct: 382 VAANDNPNLWHQRLGHMSEKGMKIMHSKGKLPGLQSMEIEMCEDCIFGKQKRVSFQKGGR 441
Query: 187 --------------FAGADVSSHGGAQYFVTFIDDHSRKVWIYFLKHKSDVFDAFQKWKA 232
+ VSS G QYFVTFIDDHSRKVW+YFLKHKS+VF+AF+ WKA
Sbjct: 442 TPKKERLELVHSDVWGPTTVSSISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKA 501
Query: 233 LVETETGLKLKCIRSDNGGKYDKKEFLQLCATNGIRMERTLLGTPQENEVVERMN 287
+VE ETGLK+K +R+DNGG+Y+ F + C +GIRMERT+ GTPQ+N V ERMN
Sbjct: 502 MVENETGLKIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMN 556