BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0880.1
(310 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010676254.1 PREDICTED: uncharacterized protein LOC104892119 [... 271 4e-79
KYP62383.1 Retrovirus-related Pol polyprotein from transposon TN... 258 2e-78
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 261 1e-75
>XP_010676254.1 PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris
subsp. vulgaris]
Length = 1947
Score = 271 bits (693), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 197/333 (59%), Gaps = 44/333 (13%)
Query: 1 MRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAYYH 60
M SN+GL ++W+E+V TACY++NR PH+ +D +PYEVWSG A+Y L+VFGC YYH
Sbjct: 677 MLSNAGLTRKYWSEAVKTACYLINRGPHTGIDCKVPYEVWSGRSAEYSGLRVFGCMVYYH 736
Query: 61 VKGNKLDNRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIVAMA-------- 112
V KL+ RAKK FLGY GVKGYR+W + + ++SRDV FDE+++ A
Sbjct: 737 VNEGKLEPRAKKGCFLGYGDGVKGYRIWSPSEGRVILSRDVTFDENTMFVSANKPAGDTD 796
Query: 113 --------KATVPSCGDVGSTKAQVVEVEVEDKRVSRNHDQVKHQDSTQDEEIDEPDHEE 164
+ P T+ + E V V + V D T D E DHEE
Sbjct: 797 ESTDEGSEQVVAPDPTPQVRTQGKDNEAPVSSPIVETSQRDVAVVDETADV---ESDHEE 853
Query: 165 VQGEGIQVLQQQQQDVSVHIRPKRLYKPVQRL-----GSDKPLRHYGQANVVEYALSVED 219
EG KR K QRL G + P R+ ++ YAL V +
Sbjct: 854 TVVEG----------------QKRPRKKTQRLIEQIEGRNVPGRNCCVEEMIGYALHVAE 897
Query: 220 D----EPVTFKQAITAQERESWLVAMQEEIESLHKNKTWEVVPLPEGKSVIGCKWVYKKK 275
D EP+++K+A+++ E WLVAM EE+ESLHKN+TWE+V +P+G+ V+GCKWV+K+K
Sbjct: 898 DIESPEPMSYKEAVSSNESAKWLVAMSEEMESLHKNQTWELVRIPQGRKVVGCKWVFKRK 957
Query: 276 EDSSEIKGTRYKARLVAKGYTQKEGVDYNEIFS 308
E +SE + RYKARLVAKG++Q+EGVDYNEIFS
Sbjct: 958 EGTSEGESVRYKARLVAKGFSQREGVDYNEIFS 990
>KYP62383.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 595
Score = 258 bits (660), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 198/314 (63%), Gaps = 33/314 (10%)
Query: 8 GVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAYYHVKGNKLD 67
GV +W E+V T C+++NR+P +++ P E+W+G+ +Y L+VFGC AYYHV KL
Sbjct: 230 GVTFWGEAVNTTCFLINRTPSTAISLKTPIEIWTGKPTNYSNLRVFGCNAYYHVNEGKLL 289
Query: 68 NRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDES---------SIVAMAKATVPS 118
R++K +F+GY GVKGYR+W +KK ++SRDV+FDES I A + P
Sbjct: 290 PRSRKCLFMGYGDGVKGYRIWSPSEKKVILSRDVIFDESHLFHPKLEVPITATHNSHPPQ 349
Query: 119 CGDVGSTKAQVVEVEVEDKRVSRNHDQVKHQDSTQDEEIDEPDHEEVQGEGIQVLQQQQQ 178
G V S + + ++ DK + ++ + ++S+ +E H+ + + IQ+
Sbjct: 350 VGKVESISEKTEDKDLLDKFSEASQEEEQSENSSANE-----SHQNAEPDSIQL------ 398
Query: 179 DVSVHIRPKRLYKPVQRLGSDKPLRHYGQANVVEYAL----SVEDDEPVTFKQAITAQER 234
+ + +PKR+ KP +R YG ++ YAL ++ DEP T+K+AI+ E
Sbjct: 399 NPGISQKPKRVIKPPER---------YGFEDMATYALHAAEEIDSDEPTTYKEAISHPEA 449
Query: 235 ESWLVAMQEEIESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKG 294
E W++AM+EE+ESL+KN+TW++V LP+G+ V+GCKW+YKKK SE + RYKARLVAKG
Sbjct: 450 EKWILAMREEMESLYKNQTWKLVELPKGRHVVGCKWIYKKKSIFSEKEEIRYKARLVAKG 509
Query: 295 YTQKEGVDYNEIFS 308
++QKEGVD+NEIFS
Sbjct: 510 FSQKEGVDFNEIFS 523
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 261 bits (667), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 195/313 (62%), Gaps = 28/313 (8%)
Query: 1 MRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAYYH 60
M SN+GL +WAE+V+TACY++NR PH+ + P E+WSG+ ADY LK FGCTAYYH
Sbjct: 588 MLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYH 647
Query: 61 VKGNKLDNRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIV-AMAKATVPSC 119
V KL+ RAKK +F+GY GVKG+R+W +K+ ++SR+VVFDES ++ + K T S
Sbjct: 648 VSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTS- 706
Query: 120 GDVGSTKAQVVEVEVEDKRVSRNHDQVKHQDSTQDEEIDEPDHEEVQGEGIQVLQQQQQD 179
+ GS QV + +V +N +K + E E D E I Q QD
Sbjct: 707 -ETGSLDKQV------EFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIH--QSIAQD 757
Query: 180 VSVHIRPKRLYKPVQRLGSDKPLRHYGQANVVEYALSVEDD----EPVTFKQAITAQERE 235
RP+ R+G P R YG ++V YAL V ++ EP T+K+AI + + E
Sbjct: 758 -----RPR-------RVGVRPPTR-YGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSE 804
Query: 236 SWLVAMQEEIESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKGY 295
W AM +E+ESLHKN+TW++V P G+ +I CKWV+KKKE S +G +YKAR+VA+G+
Sbjct: 805 KWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGF 864
Query: 296 TQKEGVDYNEIFS 308
Q+EGVDYNEIFS
Sbjct: 865 NQREGVDYNEIFS 877