BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0890.1
(192 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008458955.1 PREDICTED: F-box protein CPR30-like [Cucumis melo] 92 1e-18
XP_012078087.1 PREDICTED: F-box protein CPR30-like [Jatropha cur... 92 2e-18
XP_007026271.1 F-box family protein, putative [Theobroma cacao] ... 91 2e-18
>XP_008458955.1 PREDICTED: F-box protein CPR30-like [Cucumis melo]
Length = 434
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 10/178 (5%)
Query: 1 MKNIHYKILGGTNGVFLNGALHWIATPAVGGRWTKVSCTIILSFDVVDERFSEVPLHEKL 60
++++ Y + GVF+N ALHW+ + +G ++++FD+ +RF ++PL E
Sbjct: 239 IESMRYILRSSKMGVFVNNALHWVVSENLGMELAD----LVVAFDLGTDRFEDIPLPELT 294
Query: 61 NTKTLSPLIHLNVLGECLCVFDNIREVHTEVWVMKE---REDWIKLFTITRDNVIKSITY 117
+ K IH++VLG CLC+ N V EVWVMKE +E W+KL T+++ + + SI
Sbjct: 295 DFKCE---IHVDVLGGCLCLLANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 351
Query: 118 MNPLKCLNNGDVLMICSGWNDLVLYDPKHKKCTISKLSDMPICFDLVASVGTLVSLNS 175
+ PL G +++ L+ YD + + + +P FD V +L+S+++
Sbjct: 352 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDA 409
>XP_012078087.1 PREDICTED: F-box protein CPR30-like [Jatropha curcas] KDP32917.1
hypothetical protein JCGZ_13698 [Jatropha curcas]
Length = 387
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
Query: 5 HYKILGGTNGVFLNGALHWIATPAVGGRWTKVSCTIILSFDVVDERFSEVPLHEKLNTKT 64
++ + G NG+F++GALHW+ + + V I++ D+ E + EVP E +
Sbjct: 191 YFVLYPGANGMFVSGALHWLVSQSPESNVADV----IVALDLGVEDYREVPQPEGMGKNF 246
Query: 65 LSPLIHLNVLGECLCVFDNIREVHTEVWVMKE---REDWIKLFTITRDNVIKSITYMNPL 121
+ + +L CLC+ N + +T+VWVMK+ +E W K F+I++ VI S+ PL
Sbjct: 247 K---MDMGILHGCLCLLGNFQGQNTDVWVMKKYGVKESWTKSFSISQHEVIGSLRPFKPL 303
Query: 122 KCLNNGDVLMICSGWNDLVLYDPKHKKCTISKLSDMPICFDLVASVGTLVSLNSGTYFN 180
+G+ +++ +L YDP K+ + +MPI F+ VG+LV +N+ +
Sbjct: 304 AYSRSGNAVLMEHDNINLFWYDPSKKEAENVLIQNMPITFETELYVGSLVPINANRFLQ 362
>XP_007026271.1 F-box family protein, putative [Theobroma cacao] EOY28893.1 F-box
family protein, putative [Theobroma cacao]
Length = 415
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 11 GTNGVFLNGALHWIATPAVGGRWTKVSCTIILSFDVVDERFSEVPLHEKLNTKTLSPLIH 70
G NGVF +GALHW+ T V +I++ D+ E++ E+P E ++ + +
Sbjct: 227 GVNGVFASGALHWVLTHKV----QLSEENVIVALDLAAEKYREIPQPEYIDKRFQ---LD 279
Query: 71 LNVLGECLCVFDNIREVHTEVWVMKE---REDWIKLFTITRDNVIKSITYMNPLKCLNNG 127
+ VLG CLC N +V ++WVMKE +E W +LF++ R+ VI + Y+ PL +G
Sbjct: 280 VGVLGGCLCAIANYDDVRVDLWVMKEYGLKESWTRLFSVAREEVIGPLRYVKPLAYSRSG 339
Query: 128 DVLMICSGWNDLVLYDPKHKKCTISKLSDMPICFDLVASVGTLVSL 173
D +++ + YD K +K DM + + +LVSL
Sbjct: 340 DQVLLEHNSMNHFWYDLKERKANDVWFDDMRFSCETEICLQSLVSL 385