BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0900.1
(183 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007047848.1 F-box family protein, putative [Theobroma cacao] ... 101 2e-22
XP_012477446.1 PREDICTED: F-box protein CPR30-like [Gossypium ra... 100 4e-22
KJB21917.1 hypothetical protein B456_004G021100 [Gossypium raimo... 100 5e-22
>XP_007047848.1 F-box family protein, putative [Theobroma cacao] EOX92005.1 F-box
family protein, putative [Theobroma cacao]
Length = 349
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 6 DAITTILAMLPVKSIHRFRSVSKTWLSLFSNPYFIKLHCNYAVQQNKFSLLIKQ--SDKL 63
DA+++IL+ LP+KS+ RF+SVSK W SL ++ YFIKLH +V + K +++IK+ SDK
Sbjct: 9 DAVSSILSRLPLKSLLRFKSVSKEWYSLINDLYFIKLHHRQSV-ETKVNIIIKEIRSDKF 67
Query: 64 CSIGYDSLASNKPLNLIDYPFISFKP------KLHFVGSCNGLVAFTCDHRIHLWNPSTN 117
S +D + N P ID+ + GSCNGLV I LWN ST
Sbjct: 68 LSTNFDGINFNNP-TTIDHSLKHLSGCDEGGIDVLLFGSCNGLVCLINSMTIVLWNISTR 126
Query: 118 EYSVLPAPPSPQKPKLRSVGVSCGFGYDCKLDDYK 152
+Y ++ ++ + CGFGYD DDYK
Sbjct: 127 DYKIILNKSWKERDAWWKISNFCGFGYDTINDDYK 161
>XP_012477446.1 PREDICTED: F-box protein CPR30-like [Gossypium raimondii]
Length = 395
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 3 LSDDAITTILAMLPVKSIHRFRSVSKTWLSLFSNPYFIKLHCNYAVQQNKFSLLIKQSDK 62
LS D I IL L VK + RF+ VSK W S +PYFIKLH +Y+++ N LI K
Sbjct: 4 LSHDMIIEILGCLSVKDLLRFKCVSKLWCSWIEDPYFIKLHLSYSLKTNTNHSLILHHRK 63
Query: 63 --LCSIGYDSLASNKPLNLIDYPFISFKPKLHFVGSCNGLVAFTCDH-RIHLWNPSTNEY 119
S+ YDS + + L + PF K + +GSCNGL+A D+ RI LWN ST +Y
Sbjct: 64 FQFLSVNYDSPKTTRRL---EQPFGEQKNPIQILGSCNGLLAVEYDYNRIFLWNLSTRKY 120
Query: 120 SVLPAPPSPQKPKLRSVGVSC--GFGYDCKLDDYKQGR 155
VLP+ G S GFGYD DDYK R
Sbjct: 121 QVLPSTKIDFSSSSICYGRSIYYGFGYDLVSDDYKLVR 158
>KJB21917.1 hypothetical protein B456_004G021100 [Gossypium raimondii]
Length = 377
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 3 LSDDAITTILAMLPVKSIHRFRSVSKTWLSLFSNPYFIKLHCNYAVQQNKFSLLIKQSDK 62
LS D I IL L VK + RF+ VSK W S +PYFIKLH +Y+++ N LI K
Sbjct: 4 LSHDMIIEILGCLSVKDLLRFKCVSKLWCSWIEDPYFIKLHLSYSLKTNTNHSLILHHRK 63
Query: 63 --LCSIGYDSLASNKPLNLIDYPFISFKPKLHFVGSCNGLVAFTCDH-RIHLWNPSTNEY 119
S+ YDS + + L + PF K + +GSCNGL+A D+ RI LWN ST +Y
Sbjct: 64 FQFLSVNYDSPKTTRRL---EQPFGEQKNPIQILGSCNGLLAVEYDYNRIFLWNLSTRKY 120
Query: 120 SVLPAPPSPQKPKLRSVGVSC--GFGYDCKLDDYKQGR 155
VLP+ G S GFGYD DDYK R
Sbjct: 121 QVLPSTKIDFSSSSICYGRSIYYGFGYDLVSDDYKLVR 158