BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0930.1
(484 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008388960.1 PREDICTED: DNA polymerase zeta catalytic subunit-... 312 1e-90
CAE02415.2 OSJNBa0095E20.2 [Oryza sativa Japonica Group] 282 9e-83
CAE03994.1 OSJNBb0089B03.8 [Oryza sativa Japonica Group] 284 7e-82
>XP_008388960.1 PREDICTED: DNA polymerase zeta catalytic subunit-like [Malus
domestica]
Length = 2068
Score = 312 bits (799), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 259/461 (56%), Gaps = 65/461 (14%)
Query: 3 IDEAFQVAAVIEKLQPNWNEYKKKLRHKRKDIDMQYLILQIRVEEEHLKQEKNEVPASLV 62
I+E FQV A+IEKL +WN++K L+HKR++++M+ LIL++RVEE+H K +++ A++
Sbjct: 1520 INEHFQVGAIIEKLPTSWNDFKIYLKHKRREMNMEDLILRLRVEEDHRKADRSGGFAAIE 1579
Query: 63 SKPHIVEEVKKKKPTNYKPSNQRKKGNSKFKRAGYKPNQGNSK----PCYVCGKSGHLAK 118
+ + VE K + +F ++ P N K CYVCGK GH A+
Sbjct: 1580 ANANYVE--GGNSKAKPKKNKAXAPKTKQFVQSXLAPKGKNLKKIKGACYVCGKXGHKAQ 1637
Query: 119 DCRHRKANPNPNPPTKHPRPNLAHVVETENFCAMVTETNLVTNTKDWWFDTGATKHICSE 178
DC HRK + N + + E A V+E N+V+N +W DTGATKHIC++
Sbjct: 1638 DCYHRK---DGNHGHGNNNNHANXXTTBEXLAAXVSEVNMVSNVSEWLMDTGATKHICAD 1694
Query: 179 KSQFSSYNPVKIGEQLYMGNNSSSTIVGKEKIVLNMTSGKTMTLNDVLHVLEIRKNLISV 238
++ F+ Y+P +GE+LYMGN++ S + G K+ L GK++TL +VLHV E+R+NL+S
Sbjct: 1695 RNLFTXYHPAALGEKLYMGNSAXSXVEGYGKVXLKFXXGKSLTLLNVLHVPEMRRNLVSG 1754
Query: 239 SVLNKKVFKIVIESDEVILSKGGSMWGKGIESRHNTSNNCSLLTSIQWGSRKENRTLKEM 298
+L K FK+V+ES++ +L+KG GKG
Sbjct: 1755 PILIAKGFKLVMESNKXVLTKGXMFVGKG------------------------------- 1783
Query: 299 MNSMLVSSGLPFNLWGEVILSACYVLNRVPSKTQDKTPYELWKDRKPSFKHLNVWWCLAK 358
V+ GL V VP K B++PYE+WK KP++K L VW LAK
Sbjct: 1784 ----YVADGL--------------VKLNVPLKXIBESPYEIWKGHKPTYKTLKVWGXLAK 1825
Query: 359 ---PLPKRSKIGPKTIDCVFIGYAQNSSAYRFLVINSSIDSINSNTILESRDVEFFENTF 415
PLPKR+K+GPKTID VFIGYA NS+AYRFLV+ S I I+ NTILES D EFFE+ F
Sbjct: 1826 VQVPLPKRTKLGPKTIDXVFIGYANNSAAYRFLVVKSXISDIHVNTILESADAEFFEDIF 1885
Query: 416 PRKSEI----LKRKDPESSRPSTSSETPLSDDEPRRSKRAR 452
P K + KR S ++SS +D EPRR KR +
Sbjct: 1886 PYKEKESGSNTKRVHDHSHDEASSSGVQGNDVEPRRGKRIK 1926
>CAE02415.2 OSJNBa0095E20.2 [Oryza sativa Japonica Group]
Length = 842
Score = 282 bits (721), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 179/512 (34%), Positives = 264/512 (51%), Gaps = 60/512 (11%)
Query: 5 EAFQVAAVIEKLQPNWNEYKKKLRHKRKDIDMQYLILQIRVEEE------HLKQEKNEVP 58
+ F +I KL P+W ++ L+HKR++ + LI + VEE+ K+ K
Sbjct: 113 DKFVAGGIIAKLPPSWTDFATSLKHKRQEFSVTDLIGSLGVEEKSGAKDNRAKKIKGGSS 172
Query: 59 ASLVSKPHIVEEVKKKKPTNYKPSNQRKKGNSKFKRAGYKPNQGNSKPCYVCGKSGHLAK 118
A+LV K ++ N + K + FK+ C+VCGKSGH AK
Sbjct: 173 ANLVQKKNL----HASHNNKKVKPNVKPKATTNFKKK---GKGKTKGGCFVCGKSGHWAK 225
Query: 119 DCRHRKANPNPNPPTKHPRPNLAHVVETENFCAMVTETNLVTNTKDWWFDTGATKHICSE 178
C RK K+ ++ T + + V ++ DW DTGA H+C++
Sbjct: 226 HCPERK-------DKKYANTVISEGGGTSRYGKYLPTVLSVCHSPDWSVDTGANIHVCAD 278
Query: 179 KSQFSSYNPVKIGEQLYMGNNSSSTIVGKEKIVLNMTSGKTMTLNDVLHVLEIRKNLISV 238
S FSSY V G L MGN S + + G + L TSGK + L +V HV I+KNL+S
Sbjct: 279 ISLFSSYQ-VGRGSSLLMGNGSLAAVHGVGMVDLKFTSGKIVQLKNVQHVPSIKKNLVSG 337
Query: 239 SVLNKKVFKIVIESDEVILSKGGSMWGKGIESRHNTSNNCSLLTSIQWGSRKENRTLKEM 298
+L + F++V ES++ ++ K G+ GK H + S ++ + ++NRTL EM
Sbjct: 338 FLLCRDGFRLVFESNKCVVPKYGTFIGKEYGIIHERTPPYSPQSNGV--AERKNRTLTEM 395
Query: 299 MNSMLVSSGLPFNLWGEVILSACYVLNRVPSKTQDKTPYELWKDRKPSFKHLNVWWCLAK 358
+N+ML ++G WGE IL+ C+VLNR+P+K + TP+E W+ +K + HL W CLAK
Sbjct: 396 VNTMLDTAGHSKEWWGEAILTVCHVLNRIPTKYKKVTPFEEWERKKLNLSHLRTWGCLAK 455
Query: 359 ---PLPKRSKIGPKTIDCVFIGYAQNSSAYRFLVINSSIDSINSNTILESRDVEFFENTF 415
P+ K+ K+GPKT+DCVF+GYA +S YRFL++NS + + TI ESRD FF N F
Sbjct: 456 VNVPIAKKHKLGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMRVGTITESRDATFFGNEF 515
Query: 416 PRKSEILKRKDPESSRPSTSSETPLSDDE-----------------------PRRSKRAR 452
K+ PSTSS+ P+ E R+SKR R
Sbjct: 516 LMKNA-----------PSTSSQEPILSPEHFVPIEHIDQTLEENLEEDNIVATRKSKRQR 564
Query: 453 TEHSFGPDFLTYLTEDKPQTYSQAMTSPDAPF 484
T FG D++ YL +D P+T +A +SPDA +
Sbjct: 565 TAKYFGDDYIVYLVDDTPRTIEEAHSSPDADY 596
>CAE03994.1 OSJNBb0089B03.8 [Oryza sativa Japonica Group]
Length = 1113
Score = 284 bits (726), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 265/510 (51%), Gaps = 47/510 (9%)
Query: 2 VIDEAFQVAAVIEKLQPNWNEYKKKLRHKRKDIDMQYLILQIRVEEEHLKQEKNEVPASL 61
V+ + F +I KL P+W + L+HKR++ ++ LI + VEE+ +++
Sbjct: 109 VLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGG 168
Query: 62 VSKPHIVEEVKKKKPTNYKPSNQRKKGNSKFKRAGYKPNQGNSKPCYVCGKSGHLAKDCR 121
S ++V + + K YK K ++ + C+VCG+ GHLA+ C
Sbjct: 169 QSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDE---RTCFVCGQVGHLARKCP 225
Query: 122 HRKANPNPNPPT-KHPRPNLAHVVETENFCAMVTETNLVTNTKDWWFDTGATKHICSEKS 180
RK P T K + + + + + T + V + +WW DTGA
Sbjct: 226 QRKGMKAPAGQTSKSANVTIGNTGDGSGYGNLPTVFS-VNQSTNWWVDTGAN-------- 276
Query: 181 QFSSYNPVKIGEQLYMGNNSSSTIVGKEKIVLNMTSGKTMTLNDVLHVLEIRKNLISVSV 240
V G + MGN S +++ G + L TS K + L +V HV I +NL+S S
Sbjct: 277 -------VARGSTVLMGNGSHASVHGVGTVDLKFTSEKIVQLKNVQHVPSIDRNLVSGSR 329
Query: 241 LNKKVFKIVIESDEVIL-----SKGGSMWGKGIE---SRHNTSNNCSLLTSIQWG--SRK 290
L + FK+V ES++ + +GG + + H + + S + + +
Sbjct: 330 LTRDGFKLVFESNKTSIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAER 389
Query: 291 ENRTLKEMMNSMLVSSGLPFNLWGEVILSACYVLNRVPSKTQDKTPYELWKDRKPSFKHL 350
+NRTL +++N+ML ++GLP WGE +L++ +VLNRVP++ +DKTPYE+W RKPS +L
Sbjct: 390 KNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYL 449
Query: 351 NVWWCLAK---PLPKRSKIGPKTIDCVFIGYAQNSSAYRFLVINSSIDSINSNTILESRD 407
W CLAK P+ K+ K+GPKT+DCVF+GYA +S AYRFL++ S + ++ TI+ESRD
Sbjct: 450 RTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRD 509
Query: 408 VEFFENTFPRKSEILKRKDPESSRPST-------------SSETPLSDDEPRRSKRARTE 454
FFE+ FP K P PS+ SE +S + PRRSKR RT
Sbjct: 510 ATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVS-EAPRRSKRQRTA 568
Query: 455 HSFGPDFLTYLTEDKPQTYSQAMTSPDAPF 484
SFG DF YL +D P++ S+A SPDA +
Sbjct: 569 KSFGDDFTVYLVDDTPKSISEAYASPDADY 598