BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1010.1
(304 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016679185.1 PREDICTED: uncharacterized protein LOC107898156 [... 184 3e-52
XP_006384009.1 hypothetical protein POPTR_0004s035802g, partial ... 173 2e-46
XP_006389185.1 hypothetical protein POPTR_0039s00365g [Populus t... 169 3e-45
>XP_016679185.1 PREDICTED: uncharacterized protein LOC107898156 [Gossypium
hirsutum]
Length = 381
Score = 184 bits (468), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 157/288 (54%), Gaps = 35/288 (12%)
Query: 8 VKRKTIYSFFKPTENNNKTNAASRSNINTSLADEQPSLNTSNIVEPQRVEKDRNG---KK 64
+K KTI SFFK + + S I E P L+ + + + NG K
Sbjct: 1 MKSKTIDSFFKKKSTEATQSPSEASQI------EVPPLSFAPL--------NSNGHPSKI 46
Query: 65 PIESLEDVDVISLERDPGLRLQIWEYPVNKRDEIRRAYLNVGPYQPILEEYPRTKCGK-- 122
P E +D+ +LER+ GLR QI+EY VN RDEIRRAY+ GPY PIL EYP + K
Sbjct: 47 PRVEDEALDLSNLERELGLRKQIYEYLVNMRDEIRRAYIKAGPYPPILSEYPTSNSKKLA 106
Query: 123 ------------QFRKFQSSWFTSFPWLEYSLAKDADELKSSQADEIAKMLDVGELETGR 170
QF K S + + +K DEL+ QA +I +++ + EL TG
Sbjct: 107 LVVAARQVVEVHQFFKDLSDIVN----IALASSKRYDELQKPQAIKITRLVSINELATGI 162
Query: 171 GANQIGNLQRSGATRWSSHFGSVKSLIDMYGATCVVIRDIMQNTTNITLRGESQGLYIGM 230
G NQIG LQR G TRWSS+ SV SL+ MY AT V+ ++ +N RG++ Y
Sbjct: 163 GMNQIGTLQRPGETRWSSYLNSVTSLLKMYNATSTVLENLKNIASNYYQRGDAYNAYNRF 222
Query: 231 TSFEFVFILHLMWRIMDINDMLCQALQQKSQDIINAMNLVRTTKSLLK 278
FEF FILH+M ++ + D LCQALQ++ QDI+NA +LV T K L++
Sbjct: 223 RYFEFTFILHMMKEVLGVTDNLCQALQRRPQDILNAKSLVLTMKDLIQ 270
>XP_006384009.1 hypothetical protein POPTR_0004s035802g, partial [Populus
trichocarpa] ERP61806.1 hypothetical protein
POPTR_0004s035802g, partial [Populus trichocarpa]
Length = 546
Score = 173 bits (439), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 104/135 (77%)
Query: 144 KDADELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMYGAT 203
K EL +QA EIA M+ GE ETGRGANQIGNL RSG TRWSSHF S+ SLIDMYGAT
Sbjct: 175 KRHTELHYAQAIEIAHMVATGERETGRGANQIGNLHRSGTTRWSSHFDSICSLIDMYGAT 234
Query: 204 CVVIRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKSQDI 263
V+ ++Q ++ ++RGE+ G I M SFEF+FIL+LM +IM I D+LC+ALQQKS DI
Sbjct: 235 ITVLESMVQEGSSNSIRGEAGGCLIVMKSFEFIFILYLMHKIMGITDLLCRALQQKSLDI 294
Query: 264 INAMNLVRTTKSLLK 278
+NAM+LV TTK+LL+
Sbjct: 295 LNAMDLVSTTKALLQ 309
>XP_006389185.1 hypothetical protein POPTR_0039s00365g [Populus trichocarpa]
ERP48099.1 hypothetical protein POPTR_0039s00365g
[Populus trichocarpa]
Length = 530
Score = 169 bits (428), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 103/135 (76%)
Query: 144 KDADELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMYGAT 203
K EL +QA EIA M+ GE ETGRGANQIGNL RSG TRWSSHF S+ SLIDMYGAT
Sbjct: 159 KRHTELHYAQAIEIAHMVATGERETGRGANQIGNLHRSGTTRWSSHFDSICSLIDMYGAT 218
Query: 204 CVVIRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKSQDI 263
V+ ++Q ++ ++ GE+ G I M SFEF+FIL+LM +IM I D+LC+ALQQKS DI
Sbjct: 219 ITVLESMVQEGSSNSICGEAGGCLIVMKSFEFIFILYLMHKIMGITDLLCRALQQKSLDI 278
Query: 264 INAMNLVRTTKSLLK 278
+NAM+LV TTK+LL+
Sbjct: 279 LNAMDLVSTTKALLQ 293