BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g1090.1
         (269 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016647164.1 PREDICTED: uncharacterized mitochondrial protein ...    98   5e-21
KYP62232.1 Retrovirus-related Pol polyprotein from transposon TN...    97   7e-21
KYP38661.1 Retrovirus-related Pol polyprotein from transposon TN...   100   2e-20

>XP_016647164.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like
           [Prunus mume]
          Length = 224

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 52/69 (75%)

Query: 199 SDGSVKRYKARLVAKGCNQVEGLDYHDTFPPVAKLVTVRVLLSVASIKGWPLHQLDFITP 258
           SDGS++RYKARLVAKG  Q EG+DYHDTF P AK+VTVR +L++A+ + W LHQLD    
Sbjct: 56  SDGSIERYKARLVAKGYTQTEGIDYHDTFSPTAKMVTVRCILALAAAQNWSLHQLDVHNA 115

Query: 259 FFKATSMRR 267
           F    SMR+
Sbjct: 116 FLHGISMRK 124


>KYP62232.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 229

 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 52/65 (80%)

Query: 196 SFKSDGSVKRYKARLVAKGCNQVEGLDYHDTFPPVAKLVTVRVLLSVASIKGWPLHQLDF 255
            +KSDG+++RYKARLVAKG NQ+EGLDY DTF PVAK+ TVR+LL++AS + W LHQLD 
Sbjct: 35  KYKSDGTIERYKARLVAKGYNQIEGLDYFDTFAPVAKITTVRMLLAIASCQKWELHQLDI 94

Query: 256 ITPFF 260
              F 
Sbjct: 95  NNAFL 99


>KYP38661.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 778

 Score =  100 bits (250), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 54/66 (81%)

Query: 197 FKSDGSVKRYKARLVAKGCNQVEGLDYHDTFPPVAKLVTVRVLLSVASIKGWPLHQLDFI 256
           ++SDGS++RYKARLVAKG  Q+EG+DYHDTF PVAKLV VR+LLS+A+IK W LHQLD  
Sbjct: 388 YRSDGSIERYKARLVAKGYAQIEGIDYHDTFAPVAKLVIVRLLLSIAAIKNWSLHQLDVN 447

Query: 257 TPFFKA 262
             F + 
Sbjct: 448 NDFLQG 453


Top