BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1440.1
(155 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002311407.1 hypothetical protein POPTR_0008s10960g [Populus t... 264 1e-88
KZV41069.1 H/ACA ribonucleoprotein complex subunit 2-like protei... 264 1e-88
XP_011020801.1 PREDICTED: H/ACA ribonucleoprotein complex subuni... 260 2e-87
>XP_002311407.1 hypothetical protein POPTR_0008s10960g [Populus trichocarpa]
ABK93593.1 unknown [Populus trichocarpa] ABK94629.1
unknown [Populus trichocarpa] EEE88774.1 hypothetical
protein POPTR_0008s10960g [Populus trichocarpa]
Length = 155
Score = 264 bits (674), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 126/155 (81%), Positives = 146/155 (94%)
Query: 1 MGSDSEADRSAMKEKKKIAALAPIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVKS 60
MGSDSE +RS +KEKKKI +LAPIAKPLAGKKLCKRTLKLV+KA+ESKCLKRGVKEVVKS
Sbjct: 1 MGSDSETERSNIKEKKKITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKS 60
Query: 61 IRRGNKGLCVIAGNISPIDVITHLPVLCEEAEIPYVYVTSKEELATAGSTKRPTCCVLVL 120
IRRG+KGLC+IAGNISPIDVITH+P+LCEE++IPYVYVTSKE+LA+AG+TKRPTCCVLVL
Sbjct: 61 IRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLASAGATKRPTCCVLVL 120
Query: 121 TKPTKGELSKEKQEELKADYTQVAAEVTELAVSIF 155
TKPTKGE+ KE QE+LKADY QV ++V+EL S+F
Sbjct: 121 TKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSLF 155
>KZV41069.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Dorcoceras
hygrometricum]
Length = 155
Score = 264 bits (674), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 145/155 (93%)
Query: 1 MGSDSEADRSAMKEKKKIAALAPIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVKS 60
MGSDSEA++SA+KEKKKI ALAPIAKPLAGKKLCKRTLKLV++A E+KCLKRGVKEVVKS
Sbjct: 1 MGSDSEAEKSALKEKKKILALAPIAKPLAGKKLCKRTLKLVRRAAENKCLKRGVKEVVKS 60
Query: 61 IRRGNKGLCVIAGNISPIDVITHLPVLCEEAEIPYVYVTSKEELATAGSTKRPTCCVLVL 120
IRRGNKGLCVIAGNISPIDVITH+P+LCEEA IPYVYV SKE+LA AG+TKRPTCCVLVL
Sbjct: 61 IRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLANAGATKRPTCCVLVL 120
Query: 121 TKPTKGELSKEKQEELKADYTQVAAEVTELAVSIF 155
TKP KGEL +++QE+LK DY QVA++V+ELA S+F
Sbjct: 121 TKPAKGELGQDQQEKLKGDYDQVASDVSELANSMF 155
>XP_011020801.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
[Populus euphratica] XP_011020809.1 PREDICTED: H/ACA
ribonucleoprotein complex subunit 2-like protein
[Populus euphratica] XP_011020817.1 PREDICTED: H/ACA
ribonucleoprotein complex subunit 2-like protein
[Populus euphratica]
Length = 155
Score = 260 bits (665), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 125/155 (80%), Positives = 145/155 (93%)
Query: 1 MGSDSEADRSAMKEKKKIAALAPIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVKS 60
MGSDSE +RS +KEKKKI +LAPIAKPLAGKKLCKRTLKLV+KA+ESKCLKRGVKEVVKS
Sbjct: 1 MGSDSETERSKIKEKKKITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKS 60
Query: 61 IRRGNKGLCVIAGNISPIDVITHLPVLCEEAEIPYVYVTSKEELATAGSTKRPTCCVLVL 120
IRRG+KGLC+IAGNISPIDVITH+P+LCEE++IPYVYV SKE+LA+AG+TKRPTCCVLVL
Sbjct: 61 IRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVPSKEDLASAGATKRPTCCVLVL 120
Query: 121 TKPTKGELSKEKQEELKADYTQVAAEVTELAVSIF 155
TKPTKGE+ KE QE+LKADY QV ++V+EL S+F
Sbjct: 121 TKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSLF 155