BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0010.1
(118 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABF81447.1 NBS type disease resistance protein [Populus trichoca... 190 4e-54
KYP35061.1 Retrovirus-related Pol polyprotein from transposon TN... 157 5e-46
XP_013670379.1 PREDICTED: uncharacterized mitochondrial protein ... 159 2e-45
>ABF81447.1 NBS type disease resistance protein [Populus trichocarpa]
Length = 972
Score = 190 bits (483), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 106/118 (89%), Gaps = 1/118 (0%)
Query: 1 GVELRKFTRRSDVDPTYFKSLIGNLRYLTCTRPDILYGVGMVSMYMETLDESHLNVAKRL 60
GVELRK ++ +VDPTYFKSL+G+LRYLTCTRPDILYGVG+VS YMET D+SHLN AKR+
Sbjct: 257 GVELRK-SKVGNVDPTYFKSLVGSLRYLTCTRPDILYGVGLVSRYMETPDQSHLNAAKRI 315
Query: 61 LRYVKGTLNDGLFFSCEQDFKLIDYSDSDWGRHLDERKSTSGFVFFMGYTAFTWSSKK 118
LRY+KGT+N+G+F++ +DF L+ YSDSDWGR LDERKST+GFVFFMG T+FTWSSKK
Sbjct: 316 LRYIKGTMNEGMFYTSSKDFNLVGYSDSDWGRDLDERKSTTGFVFFMGDTSFTWSSKK 373
>KYP35061.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP41722.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 240
Score = 157 bits (396), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 74/118 (62%), Positives = 91/118 (77%)
Query: 1 GVELRKFTRRSDVDPTYFKSLIGNLRYLTCTRPDILYGVGMVSMYMETLDESHLNVAKRL 60
G++L K VDPT +KSL+G+LRYLTCTRPDILY VG+VS YME +HL AKR+
Sbjct: 4 GIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRI 63
Query: 61 LRYVKGTLNDGLFFSCEQDFKLIDYSDSDWGRHLDERKSTSGFVFFMGYTAFTWSSKK 118
LRY+KGT + GL++S D+KL+ YSDSDW +D+RKSTSGFVF+MG TAFTW SKK
Sbjct: 64 LRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKK 121
>XP_013670379.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
partial [Brassica napus]
Length = 378
Score = 159 bits (402), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 92/118 (77%)
Query: 1 GVELRKFTRRSDVDPTYFKSLIGNLRYLTCTRPDILYGVGMVSMYMETLDESHLNVAKRL 60
GV+L K VDPT FKSL+G+LRYLTCTRPDIL+ VG+VS YME +H AKR+
Sbjct: 135 GVKLSKEEEGESVDPTLFKSLVGSLRYLTCTRPDILHAVGVVSRYMEHPTTTHFKAAKRI 194
Query: 61 LRYVKGTLNDGLFFSCEQDFKLIDYSDSDWGRHLDERKSTSGFVFFMGYTAFTWSSKK 118
LRY+KGT+N GL++S +D++LI YSDSDWG +D+RKSTSGFVFF+G T FTW SKK
Sbjct: 195 LRYIKGTINFGLYYSISEDYRLIGYSDSDWGGDVDDRKSTSGFVFFIGETVFTWMSKK 252