BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0040.1
(166 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP57148.1 Retrovirus-related Pol polyprotein from transposon TN... 224 2e-72
KYP47917.1 Retrovirus-related Pol polyprotein from transposon TN... 224 8e-70
KYP39695.1 Copia protein [Cajanus cajan] 224 1e-69
>KYP57148.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 181
Score = 224 bits (571), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 107/156 (68%), Positives = 126/156 (80%), Gaps = 2/156 (1%)
Query: 1 MELPPGVTNSEVGKVCKFKKALYGLKQSPRAWFGRITKSMKAFGYKQSNSNHTLFIKQKL 60
M+ PPG+TNS KVCK KKALYGLKQSPRAWFGR TKSMKAFGY+ SNS HTLF+K+
Sbjct: 18 MDSPPGMTNSIGMKVCKLKKALYGLKQSPRAWFGRFTKSMKAFGYRASNSYHTLFLKRGK 77
Query: 61 GKLTALIVYVDDMVVTRNDSVEMEALKNYLSREFEMKDLGQLKYFLGIEVAKSSQGIFMS 120
GK+TALI+YVDDM+VT ND E+ +L+ YL+ EFEMK LG LKYFLGIEVA+S GIF
Sbjct: 78 GKVTALIIYVDDMIVTGNDQDEISSLQQYLASEFEMKQLGNLKYFLGIEVARSKHGIFRC 137
Query: 121 QRKYILDLLVETGMLDYKPVDTPIEANHHLRIFQIN 156
QRKY +DLL ETG+L KP+DTPIE NH ++FQ +
Sbjct: 138 QRKYTIDLLSETGLLGSKPIDTPIEQNH--KLFQCS 171
>KYP47917.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 386
Score = 224 bits (571), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 107/156 (68%), Positives = 126/156 (80%), Gaps = 2/156 (1%)
Query: 1 MELPPGVTNSEVGKVCKFKKALYGLKQSPRAWFGRITKSMKAFGYKQSNSNHTLFIKQKL 60
M+ PPG+TNS KVCK KKALYGLKQSPRAWFGR TKSMKAFGY+ SNS HTLF+K+
Sbjct: 1 MDSPPGMTNSIGMKVCKLKKALYGLKQSPRAWFGRFTKSMKAFGYRASNSYHTLFLKRGK 60
Query: 61 GKLTALIVYVDDMVVTRNDSVEMEALKNYLSREFEMKDLGQLKYFLGIEVAKSSQGIFMS 120
GK+TALI+YVDDM+VT ND E+ +L+ YL+ EFEMK LG LKYFLGIEVA+S GIF
Sbjct: 61 GKVTALIIYVDDMIVTGNDQDEISSLQQYLASEFEMKQLGNLKYFLGIEVARSKHGIFRC 120
Query: 121 QRKYILDLLVETGMLDYKPVDTPIEANHHLRIFQIN 156
QRKY +DLL ETG+L KP+DTPIE NH ++FQ +
Sbjct: 121 QRKYTIDLLSETGLLGSKPIDTPIEQNH--KLFQCS 154
>KYP39695.1 Copia protein [Cajanus cajan]
Length = 388
Score = 224 bits (571), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 125/155 (80%), Gaps = 2/155 (1%)
Query: 1 MELPPGV--TNSEVGKVCKFKKALYGLKQSPRAWFGRITKSMKAFGYKQSNSNHTLFIKQ 58
ME+PPGV S+ VCK KKALYGLKQSPRAWFGR+T +MK FGYKQSNS+HTLFIK
Sbjct: 1 MEVPPGVQLAPSKESVVCKLKKALYGLKQSPRAWFGRLTLAMKKFGYKQSNSDHTLFIKH 60
Query: 59 KLGKLTALIVYVDDMVVTRNDSVEMEALKNYLSREFEMKDLGQLKYFLGIEVAKSSQGIF 118
GK+ LIVYVDDMV+T +D EM+ L+ L+ EFEMKDLGQLKYFLGIE+A+S QGIF
Sbjct: 61 TKGKVAILIVYVDDMVLTGDDVEEMKLLEKRLAAEFEMKDLGQLKYFLGIEIARSEQGIF 120
Query: 119 MSQRKYILDLLVETGMLDYKPVDTPIEANHHLRIF 153
+SQRKY+LDLL ETGML KP DTPIE NH L I+
Sbjct: 121 LSQRKYVLDLLSETGMLACKPADTPIEMNHSLAIY 155