BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0060.1
(141 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP36170.1 Retrovirus-related Pol polyprotein from transposon TN... 170 2e-46
KYP39692.1 Retrovirus-related Pol polyprotein from transposon TN... 170 2e-46
KYP39694.1 Retrovirus-related Pol polyprotein from transposon TN... 169 2e-46
>KYP36170.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 953
Score = 170 bits (430), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 101/141 (71%)
Query: 1 MVLTQSRRRIQVYQSDNEGEFTSDDMSKFLINNDSRHQTSNAYTPQQNGLAERMNRQLLE 60
MV TQ IQ++Q+DN E+ + S+FL + +HQTS YTPQQNGLAER NRQLLE
Sbjct: 223 MVQTQFNTSIQIFQTDNGLEYKNGPFSEFLTSKGIKHQTSCTYTPQQNGLAERKNRQLLE 282
Query: 61 VIRASLFGMNMPLNYWGEALKSVAYVINRTPSRFIEFQTPFKKLHDLITIPAMPNLESRV 120
V+RASLF MN+P +YWGEA+ S AY+INRTPS + F TP +KL +IP + NLE RV
Sbjct: 283 VVRASLFDMNVPSHYWGEAVLSAAYLINRTPSSVLGFLTPQQKLETFFSIPHVMNLEPRV 342
Query: 121 FGCVVFVHIPKHQRGKLNHCA 141
FGC +VH+PK R KL+ CA
Sbjct: 343 FGCTAYVHVPKKLRSKLDPCA 363
>KYP39692.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1082
Score = 170 bits (430), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 101/141 (71%)
Query: 1 MVLTQSRRRIQVYQSDNEGEFTSDDMSKFLINNDSRHQTSNAYTPQQNGLAERMNRQLLE 60
MV TQ IQ++Q+DN E+ + S+FL + +HQTS YTPQQNGLAER NRQLLE
Sbjct: 223 MVQTQFNTSIQIFQTDNGLEYKNGPFSEFLTSKGIKHQTSCTYTPQQNGLAERKNRQLLE 282
Query: 61 VIRASLFGMNMPLNYWGEALKSVAYVINRTPSRFIEFQTPFKKLHDLITIPAMPNLESRV 120
V+RASLF MN+P +YWGEA+ S AY+INRTPS + F TP +KL +IP + NLE RV
Sbjct: 283 VVRASLFDMNVPSHYWGEAVLSAAYLINRTPSSVLGFLTPQQKLETFFSIPHVMNLEPRV 342
Query: 121 FGCVVFVHIPKHQRGKLNHCA 141
FGC +VH+PK R KL+ CA
Sbjct: 343 FGCTAYVHVPKKLRSKLDPCA 363
>KYP39694.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1323
Score = 169 bits (429), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 101/141 (71%)
Query: 1 MVLTQSRRRIQVYQSDNEGEFTSDDMSKFLINNDSRHQTSNAYTPQQNGLAERMNRQLLE 60
MV TQ IQ++Q+DN E+ + S+FL + +HQTS YTPQQNGLAER NRQLLE
Sbjct: 528 MVQTQFNTSIQIFQTDNGLEYKNGPFSEFLTSKGIKHQTSCTYTPQQNGLAERKNRQLLE 587
Query: 61 VIRASLFGMNMPLNYWGEALKSVAYVINRTPSRFIEFQTPFKKLHDLITIPAMPNLESRV 120
V+RASLF MN+P +YWGEA+ S AY+INRTPS + F TP +KL +IP + NLE RV
Sbjct: 588 VVRASLFDMNVPSHYWGEAVLSAAYLINRTPSSVLGFLTPQQKLETFFSIPHVMNLEPRV 647
Query: 121 FGCVVFVHIPKHQRGKLNHCA 141
FGC +VH+PK R KL+ CA
Sbjct: 648 FGCTAYVHVPKKLRSKLDPCA 668