BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0110.1
(238 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006451562.1 hypothetical protein CICLE_v10009346mg [Citrus cl... 461 e-164
XP_010261940.1 PREDICTED: 40S ribosomal protein S3-3-like [Nelum... 461 e-164
XP_010273935.1 PREDICTED: 40S ribosomal protein S3-3-like [Nelum... 460 e-163
>XP_006451562.1 hypothetical protein CICLE_v10009346mg [Citrus clementina]
XP_006490820.1 PREDICTED: 40S ribosomal protein S3-3
[Citrus sinensis] ESR64802.1 hypothetical protein
CICLE_v10009346mg [Citrus clementina] KDO53538.1
hypothetical protein CISIN_1g026588mg [Citrus sinensis]
Length = 236
Score = 461 bits (1186), Expect = e-164, Method: Compositional matrix adjust.
Identities = 222/235 (94%), Positives = 229/235 (97%)
Query: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHHPKDEEEYIRPTPVATDIEVPVPI 235
VLGIKVKIML WDP GKQGP TPLPDLVTIH PKDEEEY++PT VATDIEVP+ +
Sbjct: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
>XP_010261940.1 PREDICTED: 40S ribosomal protein S3-3-like [Nelumbo nucifera]
Length = 234
Score = 461 bits (1185), Expect = e-164, Method: Compositional matrix adjust.
Identities = 224/231 (96%), Positives = 228/231 (98%)
Query: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHHPKDEEEYIRPTPVATDIEV 231
VLGIKVKIMLDWDPKGKQGP TPLPDLVTIH PK+EEEYIRP+ +ATDIEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYIRPSLLATDIEV 231
>XP_010273935.1 PREDICTED: 40S ribosomal protein S3-3-like [Nelumbo nucifera]
Length = 234
Score = 460 bits (1183), Expect = e-163, Method: Compositional matrix adjust.
Identities = 223/231 (96%), Positives = 228/231 (98%)
Query: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHHPKDEEEYIRPTPVATDIEV 231
VLGIKVKIMLDWDPKGKQGP TPLPDLVTIH PK+EEEYI+P+ +ATDIEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYIKPSLLATDIEV 231