BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0320.1
(195 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN72863.1 hypothetical protein VITISV_029729 [Vitis vinifera] 203 6e-61
CAN79540.1 hypothetical protein VITISV_016973 [Vitis vinifera] 181 3e-50
JAT65344.1 Retrovirus-related Pol polyprotein from transposon TN... 171 3e-49
>CAN72863.1 hypothetical protein VITISV_029729 [Vitis vinifera]
Length = 402
Score = 203 bits (517), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 140/225 (62%), Gaps = 30/225 (13%)
Query: 1 MLIASRSMVEIDKLKCQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKGYIERVVS 60
ML+A + +D++K L EFEMKD+G+ K+ILGMEI+R+RS K L LSQK YI +V+S
Sbjct: 178 MLVACKEKRHLDQVKEMLKVEFEMKDLGSTKRILGMEIERDRSKKVLRLSQKSYISKVLS 237
Query: 61 RFGMQNAKAVSTPLAPHFRLSGEQFPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDISQ 120
RF M N K VSTPL HFRLS Q P T EK M +PYAS VGSLMY MVC+RPD++
Sbjct: 238 RFEMNNVKTVSTPLGQHFRLSITQAPETHEEKRFMQMIPYASMVGSLMYTMVCSRPDLAY 297
Query: 121 AVSVSK-------------------------YDS-----LGENQVHHARTKHIDVRYHFV 150
AVS+ K YD+ L +NQ H ++KHID+R HF+
Sbjct: 298 AVSMIKAVKEEIWLKGITEELSMYRGKFIVYYDNHSAIHLAKNQSFHEKSKHIDLRLHFM 357
Query: 151 QDVVEEGDVSLMKVHTDENPADMLTKVVTCSKFQHCPELLQIGSC 195
+D + D+ + KV T +NP+DMLTK + +KF+HC L+ +G C
Sbjct: 358 RDTIAARDIGVGKVPTKDNPSDMLTKSLNVTKFKHCLNLVNMGDC 402
>CAN79540.1 hypothetical protein VITISV_016973 [Vitis vinifera]
Length = 699
Score = 181 bits (459), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 125/199 (62%), Gaps = 7/199 (3%)
Query: 1 MLIASRSMVEIDKLKCQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKGYIERVVS 60
MLI + EI K+K QL++EFEMKD+G KKIL EI R R + KL LSQK YIE+V
Sbjct: 499 MLIVANDKEEIRKVKVQLNKEFEMKDLGTTKKILXXEIMRNRKAGKLNLSQKXYIEKVFH 558
Query: 61 RFGMQNAKAVSTPLAPHFRLSGEQFPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDIS- 119
RF MQNAK VSTPL F LS P + D+M RVPY+S VGS MYAM+ ++
Sbjct: 559 RFNMQNAKPVSTPLVARFGLSYVLSPQLDDDXDYMSRVPYSSXVGSXMYAMILGELEMEL 618
Query: 120 ------QAVSVSKYDSLGENQVHHARTKHIDVRYHFVQDVVEEGDVSLMKVHTDENPADM 173
+ + + L ++Q+ H RTKH DVRYHFV D++ GD+ + KV T +NP +M
Sbjct: 619 LGMSIXILLVILIKEDLLQDQMFHERTKHFDVRYHFVXDIIASGDIVVAKVSTHDNPINM 678
Query: 174 LTKVVTCSKFQHCPELLQI 192
TK + +KF+HC +L+ I
Sbjct: 679 XTKXLPIAKFEHCLDLVSI 697
>JAT65344.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 346
Score = 171 bits (434), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 111/148 (75%), Gaps = 3/148 (2%)
Query: 1 MLIASRSMVEIDKLKCQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKGYIERVVS 60
MLIA+ + EI++LK LS EFEMKD+GAAKKILGMEI+R R + KL+L+Q Y+++V+
Sbjct: 31 MLIAAADIYEINQLKALLSSEFEMKDLGAAKKILGMEIQRNRGAGKLFLTQARYVQKVLQ 90
Query: 61 RFGMQNAKAVSTPLAPHFRLSGEQFPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDISQ 120
RF M +AK VSTPLA HF+LS P +T E+ +M RVPY+SAVGSLMYAMVCTRPDISQ
Sbjct: 91 RFDMWDAKPVSTPLAVHFKLSASLSPQSTDEEVYMSRVPYSSAVGSLMYAMVCTRPDISQ 150
Query: 121 AVS-VSKYDSLGENQVHHARTKHIDVRY 147
AVS VS+Y S +VH K I RY
Sbjct: 151 AVSVVSRYMS-NPGKVHWQAVKWI-FRY 176
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 130 LGENQVHHARTKHIDVRYHFVQDVVEEGDVSLMKVHTDENPADMLTKVVTCSKFQHC 186
L +N V HARTKHI +RYHF+++++ G +SL K+ EN ADMLTK+VT K + C
Sbjct: 282 LAKNPVFHARTKHIQLRYHFIRELLNGGTLSLKKIRGTENIADMLTKIVTTEKLRLC 338